fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G63030.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm054799 not found in 207aa AT4G25480.1 1st_not 0.493297587 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G63030.1     ------------------------MENDDITVAEMKPKKRAGRRIFKETRHPIYRGVRRR
gm054799_Glyma2 MFSINHFSDPDATSPGSGGSSRPALSDEDFFLAASNPKKRAGRKKFRETRHPVYRGVRRR
                                        :.::*: :*  :*******: *:*****:*******

AT1G63030.1     DGDKWVCEVREPIHQRRVWLGTYPTADMAARAHDVAVLALRGRSACLNFSDSAWRLPVPA
gm054799_Glyma2 DSGKWVCEVREPNKKSRIWLGTFPTAEMAARAHDVAAIALRGRSACLNFADSASRLPVPA
                *..********* :: *:****:***:*********.:***********:*** ******

AT1G63030.1     STDPDTIRRTAAEAAEMFRPPEFSTGITVLPSASEFDTSDEGVAGMMMR-LAEEPLMSPP
gm054799_Glyma2 TAEARDIQKAAAEAAEAFRPGKDDDAVAERVAATATEREEEQEEGMVPEYLRNMVLMSPT
                :::.  *:::****** *** : . .::   :*:  : .:*   **: . * :  ****.

AT1G63030.1     RSYIDMNTSVYVDEEMCYED--LSLWSY--
gm054799_Glyma2 HCF---GSDEYGSADVEFDDAEVSLWSYSI
                :.:   .:. * . :: ::*  :*****
BoxShade v3.31 C (beta, 970507) Output
AT1G63030.1     - - - - - - - - - - - - - - - - - - - - - - - - M E N D D I T V A E M K P K K R A G R R I F K E T R H P I Y R G V R R R
gm054799_Glyma2    M F S I N H F S D P D A T S P G S G G S S R P A L S D E D F F L A A S N P K K R A G R K K F R E T R H P V Y R G V R R R
 
AT1G63030.1     D G D K W V C E V R E P I H Q R R V W L G T Y P T A D M A A R A H D V A V L A L R G R S A C L N F S D S A W R L P V P A
gm054799_Glyma2    D S G K W V C E V R E P N K K S R I W L G T F P T A E M A A R A H D V A A I A L R G R S A C L N F A D S A S R L P V P A
 
AT1G63030.1     S T D P D T I R R T A A E A A E M F R P P E F S T G I T V L P S A S E F D T S D E G V A G M M M R - L A E E P L M S P P
gm054799_Glyma2    T A E A R D I Q K A A A E A A E A F R P G K D D D A V A E R V A A T A T E R E E E Q E E G M V P E Y L R N M V L M S P T
 
AT1G63030.1     R S Y I D M N T S V Y V D E E M C Y E D - - L S L W S Y - -
gm054799_Glyma2    H C F - - - G S D E Y G S A D V E F D D A E V S L W S Y S I
 
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