fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G63480.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm029592 not found in 352aa AT1G63470.1 1st_not 0.416282642 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G63480.1     MDGREAMAFPGSHSQYYLQR---GAFTNLAPSQVASGLHAPPPHTGLRPMSNPNIHHPQA
gm029592_Glyma1 MDGREGMAFPGGSAPYYMQHRGGGVGGSVPGTGTQSGGFQPP--SGFRALSNV-------
                *****.*****. : **:*:   *.  .:. : . ** . **  :*:*.:**        

AT1G63480.1     NNPG--------PPFSDFGHTIHMGVVSSASDADVQPPPPPPPPEEPMVKRKRGRPRKYG
gm029592_Glyma1 -SPGSAFKVESQPQHASFSHGINTG---SSPDGGSGVPSSGEP-----VKKKRGRPRKYG
                 .**        * .:.*.* *: *   *:.*..   *..  *     **:*********

AT1G63480.1     ---------EPMVSNKSRDSSPMSDPNEPKRARGRPPGTGRKQRLANLGEWMNTSAGLAF
gm029592_Glyma1 PDGSVSLMLSPM--SATANSTPGSGTSSEKRPRGRPPGSGRKQQLATLGEWMNNSAGLAF
                         .**  . : :*:* *.... **.******:****:**.******.******

AT1G63480.1     APHVISIGAGEDIAAKVLSFSQQRPRALCIMSGTGTISSVTLCKPGSTDRHLTYEGPFEI
gm029592_Glyma1 SPHVITVGVGEDIVAKLLSFARQRPRAVCILTGTGTISSVTLRQPASTSISVTYEGRFQI
                :****::*.****.**:***::*****:**::********** :*.**.  :**** *:*

AT1G63480.1     ISFGGSYLVNEEGGSRSRTGGLSVSLSRPDGSIIAGGVDMLIAANLVQVVACSFVYGARA
gm029592_Glyma1 LCLSGSYLVAEEGGPHNRTGGMSVSLSSPDGHIIGGGVTRLVAASPVQVVACSFVYGGSK
                :.:.***** ****.:.****:***** *** **.***  *:**. ***********.  

AT1G63480.1     KTHNNNNKTIRQEKEPNEEDNNSEMETTPGSAAEPAASAGQQTPQNFSSQGIRGWPGSGS
gm029592_Glyma1 PKTKEVTTTTTTTKDSSSEPQSSDKLASPASAPPPNQNYTSSSP----SPGI--WP----
                 . :: ..*    *:...* :.*:  ::*.**. *  .  ..:*    * **  **    

AT1G63480.1     GSGRSLDI-CRNPLTDFDLTRG
gm029592_Glyma1 ASSRPVEVKSAHPHTGIDLTRG
                .*.*.::: . :* *.:*****
BoxShade v3.31 C (beta, 970507) Output
AT1G63480.1     M D G R E A M A F P G S H S Q Y Y L Q R - - - G A F T N L A P S Q V A S G L H A P P P H T G L R P M S N P N I H H P Q A
gm029592_Glyma1    M D G R E G M A F P G G S A P Y Y M Q H R G G G V G G S V P G T G T Q S G G F Q P P - - S G F R A L S N V - - - - - - -
 
AT1G63480.1     N N P G - - - - - - - - P P F S D F G H T I H M G V V S S A S D A D V Q P P P P P P P P E E P M V K R K R G R P R K Y G
gm029592_Glyma1    - S P G S A F K V E S Q P Q H A S F S H G I N T G - - - S S P D G G S G V P S S G E P - - - - - V K K K R G R P R K Y G
 
AT1G63480.1     - - - - - - - - - E P M V S N K S R D S S P M S D P N E P K R A R G R P P G T G R K Q R L A N L G E W M N T S A G L A F
gm029592_Glyma1    P D G S V S L M L S P M - - S A T A N S T P G S G T S S E K R P R G R P P G S G R K Q Q L A T L G E W M N N S A G L A F
 
AT1G63480.1     A P H V I S I G A G E D I A A K V L S F S Q Q R P R A L C I M S G T G T I S S V T L C K P G S T D R H L T Y E G P F E I
gm029592_Glyma1    S P H V I T V G V G E D I V A K L L S F A R Q R P R A V C I L T G T G T I S S V T L R Q P A S T S I S V T Y E G R F Q I
 
AT1G63480.1     I S F G G S Y L V N E E G G S R S R T G G L S V S L S R P D G S I I A G G V D M L I A A N L V Q V V A C S F V Y G A R A
gm029592_Glyma1    L C L S G S Y L V A E E G G P H N R T G G M S V S L S S P D G H I I G G G V T R L V A A S P V Q V V A C S F V Y G G S K
 
AT1G63480.1     K T H N N N N K T I R Q E K E P N E E D N N S E M E T T P G S A A E P A A S A G Q Q T P Q N F S S Q G I R G W P G S G S
gm029592_Glyma1    P K T K E V T T T T T T T K D S S S E P Q S S D K L A S P A S A P P P N Q N Y T S S S P - - - - S P G I - - W P - - - -
 
AT1G63480.1     G S G R S L D I - C R N P L T D F D L T R G
gm029592_Glyma1    A S S R P V E V K S A H P H T G I D L T R G
 
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