fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G63480.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm029592 not found in 352aa AT1G63470.1 1st_not 0.416282642 II
Gm002249 not found in 357aa AT1G63470.1 not_not 0.400921658 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G63480.1     MDGREAMAFPGSHSQYYLQR--GAFTNLAP-SQVASGLHAPPPHTGLRPMSNPNIHHPQA
gm029592_Glyma1 MDGREGMAFPGGSAPYYMQHRGGGVGGSVPGTGTQSGGFQPP--SGFRALSNV-------
gm002249_Glyma0 MDGREGMAFPGGSVPYYMQHRGGGVSGSGPGTGTQSGGFQPP--SGFRALSNV-------
                *****.*****.   **:*:  *.. .  * : . ** . **  :*:*.:**        

AT1G63480.1     NNPG----------------PPFSDFGHTIHMGVVSSASDADVQPPPPPPPPEEPMVKRK
gm029592_Glyma1 -SPGSAFKVE--------SQPQHASFSHGINTG---SSPDGGSGVPSSGEP-----VKKK
gm002249_Glyma0 -SPGSAFKVESHSYSHSQSQPQHASFSHGINIG---SSPDGGGGGPSSGEP-----VKKK
                 .**                * .:.*.* *: *   *:.*..   *..  *     **:*

AT1G63480.1     RGRPRKYG---------EPMVSNKSRDSSPMSDPNEPKRARGRPPGTGRKQRLANLGEWM
gm029592_Glyma1 RGRPRKYGPDGSVSLMLSPMSATAN--STPGSGTSSEKRPRGRPPGSGRKQQLATLGEWM
gm002249_Glyma0 RGRPRKYGPDGSVSLMLSPMSATAS--STPGSGTSSEKRPRGRPPGSGRKQQLATLGEWM
                ********         .** :. .  *:* *.... **.******:****:**.*****

AT1G63480.1     NTSAGLAFAPHVISIGAGEDIAAKVLSFSQQRPRALCIMSGTGTISSVTLCKPGSTDRHL
gm029592_Glyma1 NNSAGLAFSPHVITVGVGEDIVAKLLSFARQRPRAVCILTGTGTISSVTLRQPASTSISV
gm002249_Glyma0 NSSAGLAFSPHVITVGVDEDIVAKLLSFARQRPRAVCILTGTGTISSVTLRQPASTSIGV
                *.******:****::*..***.**:***::*****:**::********** :*.**.  :

AT1G63480.1     TYEGPFEIISFGGSYLVNEEGGSRSRTGGLSVSLSRPDGSIIAGGVDMLIAANLVQVVAC
gm029592_Glyma1 TYEGRFQILCLSGSYLVAEEGGPHNRTGGMSVSLSSPDGHIIGGGVTRLVAASPVQVVAC
gm002249_Glyma0 TYEGRFQILCLSGSYLVAEEGGPHNRTGGMSVSLSSPDGHIIGGGVTRLVASSPVQVVAC
                **** *:*:.:.***** ****.:.****:***** *** **.***  *:*:. ******

AT1G63480.1     SFVY-GARAKTHNNNNKTIRQEKEPNEEDNNSEMETTPGSAAEPAASAGQQTPQNFS---
gm029592_Glyma1 SFVYGGSKPKTKEVT-TTTTTTKDSSSEPQSSDKLASPASAPPPN--------QNYTSSS
gm002249_Glyma0 SFVYGGSKPKTKQV---TTTTTEDTSSEPQSSDKLASPGSVPPPN--------QNYT-SS
                **** *::.**::    *    ::...* :.*:  ::*.*.. *         **::   

AT1G63480.1     -SQGIRGWPGSGSGSGRSLDI-CRNPLTDFDLTRG
gm029592_Glyma1 PSPGI--WP----ASSRPVEVKSAHPHTGIDLTRG
gm002249_Glyma0 PAPGI--WP----ASSRPVEVKSAHAHTGIDLTRG
                 : **  **    .*.*.::: . :. *.:*****
BoxShade v3.31 C (beta, 970507) Output
AT1G63480.1     M D G R E A M A F P G S H S Q Y Y L Q R - - G A F T N L A P - S Q V A S G L H A P P P H T G L R P M S N P N I H H P Q A
gm029592_Glyma1    M D G R E G M A F P G G S A P Y Y M Q H R G G G V G G S V P G T G T Q S G G F Q P P - - S G F R A L S N V - - - - - - -
gm002249_Glyma0    M D G R E G M A F P G G S V P Y Y M Q H R G G G V S G S G P G T G T Q S G G F Q P P - - S G F R A L S N V - - - - - - -
 
AT1G63480.1     N N P G - - - - - - - - - - - - - - - - P P F S D F G H T I H M G V V S S A S D A D V Q P P P P P P P P E E P M V K R K
gm029592_Glyma1    - S P G S A F K V E - - - - - - - - S Q P Q H A S F S H G I N T G - - - S S P D G G S G V P S S G E P - - - - - V K K K
gm002249_Glyma0    - S P G S A F K V E S H S Y S H S Q S Q P Q H A S F S H G I N I G - - - S S P D G G G G G P S S G E P - - - - - V K K K
 
AT1G63480.1     R G R P R K Y G - - - - - - - - - E P M V S N K S R D S S P M S D P N E P K R A R G R P P G T G R K Q R L A N L G E W M
gm029592_Glyma1    R G R P R K Y G P D G S V S L M L S P M S A T A N - - S T P G S G T S S E K R P R G R P P G S G R K Q Q L A T L G E W M
gm002249_Glyma0    R G R P R K Y G P D G S V S L M L S P M S A T A S - - S T P G S G T S S E K R P R G R P P G S G R K Q Q L A T L G E W M
 
AT1G63480.1     N T S A G L A F A P H V I S I G A G E D I A A K V L S F S Q Q R P R A L C I M S G T G T I S S V T L C K P G S T D R H L
gm029592_Glyma1    N N S A G L A F S P H V I T V G V G E D I V A K L L S F A R Q R P R A V C I L T G T G T I S S V T L R Q P A S T S I S V
gm002249_Glyma0    N S S A G L A F S P H V I T V G V D E D I V A K L L S F A R Q R P R A V C I L T G T G T I S S V T L R Q P A S T S I G V
 
AT1G63480.1     T Y E G P F E I I S F G G S Y L V N E E G G S R S R T G G L S V S L S R P D G S I I A G G V D M L I A A N L V Q V V A C
gm029592_Glyma1    T Y E G R F Q I L C L S G S Y L V A E E G G P H N R T G G M S V S L S S P D G H I I G G G V T R L V A A S P V Q V V A C
gm002249_Glyma0    T Y E G R F Q I L C L S G S Y L V A E E G G P H N R T G G M S V S L S S P D G H I I G G G V T R L V A S S P V Q V V A C
 
AT1G63480.1     S F V Y - G A R A K T H N N N N K T I R Q E K E P N E E D N N S E M E T T P G S A A E P A A S A G Q Q T P Q N F S - - -
gm029592_Glyma1    S F V Y G G S K P K T K E V T - T T T T T T K D S S S E P Q S S D K L A S P A S A P P P N - - - - - - - - Q N Y T S S S
gm002249_Glyma0    S F V Y G G S K P K T K Q V - - - T T T T T E D T S S E P Q S S D K L A S P G S V P P P N - - - - - - - - Q N Y T - S S
 
AT1G63480.1     - S Q G I R G W P G S G S G S G R S L D I - C R N P L T D F D L T R G
gm029592_Glyma1    P S P G I - - W P - - - - A S S R P V E V K S A H P H T G I D L T R G
gm002249_Glyma0    P A P G I - - W P - - - - A S S R P V E V K S A H A H T G I D L T R G
 
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