Input
| Putative repression domain
|
|
AT1G66140.1 |
DYKPISLNLSLSFNNN at 34/260 in AT1G66140.1 |
|
ESSLPDLTLKL at 254/260 in AT1G66140.1 |
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Gm004975 |
NSDAISLDLSLNFKNS in 61/257 |
AT1G66140.1 |
1st_1st |
0.431578947 |
Ia |
DNSTPDLTLKL in 252/257 |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT1G66140.1 MRPILDLEIEASSG---SSSSQVASNLS---------------------PVG--EDYKPI
gm004975_Glyma0 MKPNFDLEVEACAAYESEVSSQVASNVSIQETSIGPCSDSLTNISNITNPIGIHPNSDAI
*:* :***:**.:. . *******:* *:* : ..*
AT1G66140.1 SLNLSLSFNNNNNNNLDLESSSLTLPLSSTSESSNPEQQQQQQPSVSKRVFSCNYCQRKF
gm004975_Glyma0 SLDLSLNFKNSAPGGRD----SIGFSFSSTSESSN-EPASQTTAATIPRVFSCNYCQRKF
**:***.*:*. .. * *: :.:******** * .* .:. ************
AT1G66140.1 YSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAAATAAALSCLPLHGSGN
gm004975_Glyma0 FSSQALGGHQNAHKRERTLAKRAMRMGFF--------SERY------ANLASLPLHG---
:**************************: *..* * *:.*****
AT1G66140.1 GNMTSFRTLGIRAHSSAHD-VSMTRQTPETLIRNIARFNQGYFGNCIPFYVEDDEAEMLW
gm004975_Glyma0 ----SFRSLGIKAHSSLHHGFSPTMRRPE--IKNNARFDQGYVGH--PIFLEDDESDLLW
***:***:**** *. .* * : ** *:* ***:***.*: *:::****:::**
AT1G66140.1 PGSFRQATNAVAVEAGNDN-----LGERKMDFLDVKQAMDMESSLPDLTLKL
gm004975_Glyma0 PGSFRQVA-----EAGDSHQNFILTGSSNLSFTEVNPPVDIDNSTPDLTLKL
******.: ***:.: *. ::.* :*: .:*::.* *******
BoxShade v3.31 C (beta, 970507) Output
AT1G66140.1 |
M |
R |
P |
I |
L |
D |
L |
E |
I |
E |
A |
S |
S |
G |
- |
- |
- |
S |
S |
S |
S |
Q |
V |
A |
S |
N |
L |
S |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
P |
V |
G |
- |
- |
E |
D |
Y |
K |
P |
I |
gm004975_Glyma0 |
M |
K |
P |
N |
F |
D |
L |
E |
V |
E |
A |
C |
A |
A |
Y |
E |
S |
E |
V |
S |
S |
Q |
V |
A |
S |
N |
V |
S |
I |
Q |
E |
T |
S |
I |
G |
P |
C |
S |
D |
S |
L |
T |
N |
I |
S |
N |
I |
T |
N |
P |
I |
G |
I |
H |
P |
N |
S |
D |
A |
I |
|
AT1G66140.1 |
S |
L |
N |
L |
S |
L |
S |
F |
N |
N |
N |
N |
N |
N |
N |
L |
D |
L |
E |
S |
S |
S |
L |
T |
L |
P |
L |
S |
S |
T |
S |
E |
S |
S |
N |
P |
E |
Q |
Q |
Q |
Q |
Q |
Q |
P |
S |
V |
S |
K |
R |
V |
F |
S |
C |
N |
Y |
C |
Q |
R |
K |
F |
gm004975_Glyma0 |
S |
L |
D |
L |
S |
L |
N |
F |
K |
N |
S |
A |
P |
G |
G |
R |
D |
- |
- |
- |
- |
S |
I |
G |
F |
S |
F |
S |
S |
T |
S |
E |
S |
S |
N |
- |
E |
P |
A |
S |
Q |
T |
T |
A |
A |
T |
I |
P |
R |
V |
F |
S |
C |
N |
Y |
C |
Q |
R |
K |
F |
|
AT1G66140.1 |
Y |
S |
S |
Q |
A |
L |
G |
G |
H |
Q |
N |
A |
H |
K |
R |
E |
R |
T |
L |
A |
K |
R |
A |
M |
R |
M |
G |
L |
A |
G |
V |
F |
P |
G |
R |
G |
S |
S |
S |
N |
Y |
A |
A |
A |
A |
T |
A |
A |
A |
L |
S |
C |
L |
P |
L |
H |
G |
S |
G |
N |
gm004975_Glyma0 |
F |
S |
S |
Q |
A |
L |
G |
G |
H |
Q |
N |
A |
H |
K |
R |
E |
R |
T |
L |
A |
K |
R |
A |
M |
R |
M |
G |
F |
F |
- |
- |
- |
- |
- |
- |
- |
- |
S |
E |
R |
Y |
- |
- |
- |
- |
- |
- |
A |
N |
L |
A |
S |
L |
P |
L |
H |
G |
- |
- |
- |
|
AT1G66140.1 |
G |
N |
M |
T |
S |
F |
R |
T |
L |
G |
I |
R |
A |
H |
S |
S |
A |
H |
D |
- |
V |
S |
M |
T |
R |
Q |
T |
P |
E |
T |
L |
I |
R |
N |
I |
A |
R |
F |
N |
Q |
G |
Y |
F |
G |
N |
C |
I |
P |
F |
Y |
V |
E |
D |
D |
E |
A |
E |
M |
L |
W |
gm004975_Glyma0 |
- |
- |
- |
- |
S |
F |
R |
S |
L |
G |
I |
K |
A |
H |
S |
S |
L |
H |
H |
G |
F |
S |
P |
T |
M |
R |
R |
P |
E |
- |
- |
I |
K |
N |
N |
A |
R |
F |
D |
Q |
G |
Y |
V |
G |
H |
- |
- |
P |
I |
F |
L |
E |
D |
D |
E |
S |
D |
L |
L |
W |
|
AT1G66140.1 |
P |
G |
S |
F |
R |
Q |
A |
T |
N |
A |
V |
A |
V |
E |
A |
G |
N |
D |
N |
- |
- |
- |
- |
- |
L |
G |
E |
R |
K |
M |
D |
F |
L |
D |
V |
K |
Q |
A |
M |
D |
M |
E |
S |
S |
L |
P |
D |
L |
T |
L |
K |
L |
gm004975_Glyma0 |
P |
G |
S |
F |
R |
Q |
V |
A |
- |
- |
- |
- |
- |
E |
A |
G |
D |
S |
H |
Q |
N |
F |
I |
L |
T |
G |
S |
S |
N |
L |
S |
F |
T |
E |
V |
N |
P |
P |
V |
D |
I |
D |
N |
S |
T |
P |
D |
L |
T |
L |
K |
L |
|
|