fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G66230.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt003387 not found in 321aa AT5G16600.1 1st_not 0.607675906 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G66230.1     MGRQPCCDKVGLKKGPWTAEEDRKLINFILTNGQCCWRAVPKLSGLLRCGKSCRLRWTNY
pt003387_POPTR_ MGRQPCCDKVGLKKGPWTSDEDKKLITFILANGQCCWRAVPKLAGLLRCGKSCRLRWTNY
                ******************::**:***.***:************:****************

AT1G66230.1     LRPDLKRGLLSDYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG
pt003387_POPTR_ LRPDLKRGLLSEYEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG
                ***********:**********:*************************************

AT1G66230.1     IDPLTHKPLSIVEKEDEEPLK---KLQNNTVPF-QETMERPLENNIKNISRLEESLGDD-
pt003387_POPTR_ IDPLTHKPLSTIETPPSPPPQQEVQVQENIQEIEQQAVQQSCSTNI--VSELDQNREPET
                ********** :*.  . * :   ::*:*   : *:::::. ..**  :*.*::.   : 

AT1G66230.1     -------QFMEIN----LEYG---------VEDVPLIETESLDLICS---------NSTM
pt003387_POPTR_ SLRSTVTQEEEINNMAASTYGTMEQTDGFCIDEVPLIEPHEILVPCGLSPSSTPAPTSSS
                       *  ***      **         :::*****...: : *.         .*: 

AT1G66230.1     SSSTSTSSHSSNDSSFLKDLQFPEFEWSDYGNSNNDNNNGVDNIIENNMMSLWE--ISD-
pt003387_POPTR_ SSSTSSSSSSYGSNNILEDLLLPDFEWPI---------NNVDIGLWGDYLNSWDVLISDA
                *****:** * ....:*:** :*:***.          *.**  : .: :. *:  *** 

AT1G66230.1     ------FSSLDLLLN-------DESSSTFGLF
pt003387_POPTR_ VGDWKQTTMFDPPLNQCSRMILDQDSWTNGLL
                       : :*  **       *:.* * **:
BoxShade v3.31 C (beta, 970507) Output
AT1G66230.1     M G R Q P C C D K V G L K K G P W T A E E D R K L I N F I L T N G Q C C W R A V P K L S G L L R C G K S C R L R W T N Y
pt003387_POPTR_    M G R Q P C C D K V G L K K G P W T S D E D K K L I T F I L A N G Q C C W R A V P K L A G L L R C G K S C R L R W T N Y
 
AT1G66230.1     L R P D L K R G L L S D Y E E K M V I D L H S Q L G N R W S K I A S H L P G R T D N E I K N H W N T H I K K K L R K M G
pt003387_POPTR_    L R P D L K R G L L S E Y E E K M V I D L H A Q L G N R W S K I A S H L P G R T D N E I K N H W N T H I K K K L R K M G
 
AT1G66230.1     I D P L T H K P L S I V E K E D E E P L K - - - K L Q N N T V P F - Q E T M E R P L E N N I K N I S R L E E S L G D D -
pt003387_POPTR_    I D P L T H K P L S T I E T P P S P P P Q Q E V Q V Q E N I Q E I E Q Q A V Q Q S C S T N I - - V S E L D Q N R E P E T
 
AT1G66230.1     - - - - - - - Q F M E I N - - - - L E Y G - - - - - - - - - V E D V P L I E T E S L D L I C S - - - - - - - - - N S T M
pt003387_POPTR_    S L R S T V T Q E E E I N N M A A S T Y G T M E Q T D G F C I D E V P L I E P H E I L V P C G L S P S S T P A P T S S S
 
AT1G66230.1     S S S T S T S S H S S N D S S F L K D L Q F P E F E W S D Y G N S N N D N N N G V D N I I E N N M M S L W E - - I S D -
pt003387_POPTR_    S S S T S S S S S S Y G S N N I L E D L L L P D F E W P I - - - - - - - - - N N V D I G L W G D Y L N S W D V L I S D A
 
AT1G66230.1     - - - - - - F S S L D L L L N - - - - - - - D E S S S T F G L F
pt003387_POPTR_    V G D W K Q T T M F D P P L N Q C S R M I L D Q D S W T N G L L
 
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