fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G66230.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm031703 not found in 336aa AT1G66230.1 1st_1st 0.650319829 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G66230.1     MGRQPCCDKVGLKKGPWTAEEDRKLINFILTNGQCCWRAVPKLSGLLRCGKSCRLRWTNY
gm031703_Glyma1 MGRQPCCDKVGLKKGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNY
                **********************:********************:****************

AT1G66230.1     LRPDLKRGLLSDYEEKMVIDLHSQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMG
gm031703_Glyma1 LRPDLKRGLLSEYEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLKKMG
                ***********:**********:*********************************:***

AT1G66230.1     IDPLTHKPLSIV---------EKEDEEPLKKLQNNTVPFQETM------------ERPLE
gm031703_Glyma1 IDPVTHKPLSNKTEQTQAQPDEQQTHQPLQEQQEEPIPVEKDTKFEPEKEQNKEPEKP-E
                ***:******           *:: .:**:: *::.:*.::              *:* *

AT1G66230.1     NNIKNISRLEESLGDDQFM-------EINLEYGVEDVPLIETESLDLICS---------N
gm031703_Glyma1 SSIESLTITEEAKEEDQIMTPLFDSWELMNEFCTDEVPIIESNEI-LVPSAPSSTSPTTT
                ..*:.::  **:  :**:*       *:  *: .::**:**::.: *: *         .

AT1G66230.1     STMSSSTSTSSHS-SNDSSFLKDLQFPEFEWS-DYGNSNNDNNNGVDNIIENNMMSLWEI
gm031703_Glyma1 TTTSSSTSTSASSNSNSSNFLEDLLLPDFEWSDDYNDTNFDNNN-------NSSMALWDD
                :* *******: * **.*.**:** :*:**** **.::* ****       *. *:**: 

AT1G66230.1     SDFSSLDLLLNDE------------------------SSSTFGLF
gm031703_Glyma1 DFIRSWNLLINDDDGDGDRKQVFEAPINQYPRVIMDSDSWAYGLF
                . : * :**:**:                        .* ::***
BoxShade v3.31 C (beta, 970507) Output
AT1G66230.1     M G R Q P C C D K V G L K K G P W T A E E D R K L I N F I L T N G Q C C W R A V P K L S G L L R C G K S C R L R W T N Y
gm031703_Glyma1    M G R Q P C C D K V G L K K G P W T A E E D K K L I N F I L T N G Q C C W R A V P K L A G L L R C G K S C R L R W T N Y
 
AT1G66230.1     L R P D L K R G L L S D Y E E K M V I D L H S Q L G N R W S K I A S H L P G R T D N E I K N H W N T H I K K K L R K M G
gm031703_Glyma1    L R P D L K R G L L S E Y E E K M V I D L H A Q L G N R W S K I A S H L P G R T D N E I K N H W N T H I K K K L K K M G
 
AT1G66230.1     I D P L T H K P L S I V - - - - - - - - - E K E D E E P L K K L Q N N T V P F Q E T M - - - - - - - - - - - - E R P L E
gm031703_Glyma1    I D P V T H K P L S N K T E Q T Q A Q P D E Q Q T H Q P L Q E Q Q E E P I P V E K D T K F E P E K E Q N K E P E K P - E
 
AT1G66230.1     N N I K N I S R L E E S L G D D Q F M - - - - - - - E I N L E Y G V E D V P L I E T E S L D L I C S - - - - - - - - - N
gm031703_Glyma1    S S I E S L T I T E E A K E E D Q I M T P L F D S W E L M N E F C T D E V P I I E S N E I - L V P S A P S S T S P T T T
 
AT1G66230.1     S T M S S S T S T S S H S - S N D S S F L K D L Q F P E F E W S - D Y G N S N N D N N N G V D N I I E N N M M S L W E I
gm031703_Glyma1    T T T S S S T S T S A S S N S N S S N F L E D L L L P D F E W S D D Y N D T N F D N N N - - - - - - - N S S M A L W D D
 
AT1G66230.1     S D F S S L D L L L N D E - - - - - - - - - - - - - - - - - - - - - - - - S S S T F G L F
gm031703_Glyma1    D F I R S W N L L I N D D D G D G D R K Q V F E A P I N Q Y P R V I M D S D S W A Y G L F
 
0