fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G66370.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt002112 not found in 272aa AT1G66370.1 1st_1st 0.394990366 Ib
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G66370.1     MGESPKGLRKGTWTTEEDILLRQCIDKYGEGKWHRVPLRTGLNRCRKSCRLRWLNYLKPS
pt002112_POPTR_ -MVSLLGVRKGAWTEEEDILLRKCVEKYGEGRWHQVPSKTGLNRCRKSCRLRWLNYLKPN
                   *  *:***:** *******:*::*****:**:** :********************.

AT1G66370.1     IKRGKLCSDEVDLVLRLHKLLGNR----WSLIAGRLPGRTANDVKNYWNTHLSKK--HDE
pt002112_POPTR_ IKRGQFSVDEVDLIIRLHKLLGNRQVQMWSLIAGRLPGRTANDVKNYWNTNLRKKVVSST
                ****::. *****::*********    **********************:* **   . 

AT1G66370.1     RCCKTKMINKNITSHPTSSAQKIDVLKPRPRSFSDKNSC--NDVNILPKVDVVPLHLGLN
pt002112_POPTR_ EDAQTKPEAKSIT--------KDNIIKPRPRNL--KNLCWSRAGKGTPYINVASQY----
                . .:**   *.**        * :::*****.:  ** *  .  :  * ::*.. :    

AT1G66370.1     NNYVCES-SITCNKDEQKDKLININLLDGDNMWWESLLE---------------------
pt002112_POPTR_ GDDLCQPYSTTALPPSETDEV--------ERMWWESLLDDKEINLTNNSSCLGSGSAVNQ
                .: :*:. * *.   .:.*::        :.*******:                     

AT1G66370.1     ------------------ADVLGPEATETAKGVTLPLDFE-----QIWARFDEETLELN
pt002112_POPTR_ DPIKSLFVEDNAAGGIMIGDVFCEQGQSSWAGISFDANLRNQIVTEIY-RQGPEGL---
                                  .**:  :. .:  *:::  ::.     :*: * . * *
BoxShade v3.31 C (beta, 970507) Output
AT1G66370.1     M G E S P K G L R K G T W T T E E D I L L R Q C I D K Y G E G K W H R V P L R T G L N R C R K S C R L R W L N Y L K P S
pt002112_POPTR_    - M V S L L G V R K G A W T E E E D I L L R K C V E K Y G E G R W H Q V P S K T G L N R C R K S C R L R W L N Y L K P N
 
AT1G66370.1     I K R G K L C S D E V D L V L R L H K L L G N R - - - - W S L I A G R L P G R T A N D V K N Y W N T H L S K K - - H D E
pt002112_POPTR_    I K R G Q F S V D E V D L I I R L H K L L G N R Q V Q M W S L I A G R L P G R T A N D V K N Y W N T N L R K K V V S S T
 
AT1G66370.1     R C C K T K M I N K N I T S H P T S S A Q K I D V L K P R P R S F S D K N S C - - N D V N I L P K V D V V P L H L G L N
pt002112_POPTR_    E D A Q T K P E A K S I T - - - - - - - - K D N I I K P R P R N L - - K N L C W S R A G K G T P Y I N V A S Q Y - - - -
 
AT1G66370.1     N N Y V C E S - S I T C N K D E Q K D K L I N I N L L D G D N M W W E S L L E - - - - - - - - - - - - - - - - - - - - -
pt002112_POPTR_    G D D L C Q P Y S T T A L P P S E T D E V - - - - - - - - E R M W W E S L L D D K E I N L T N N S S C L G S G S A V N Q
 
AT1G66370.1     - - - - - - - - - - - - - - - - - - A D V L G P E A T E T A K G V T L P L D F E - - - - - Q I W A R F D E E T L E L N
pt002112_POPTR_    D P I K S L F V E D N A A G G I M I G D V F C E Q G Q S S W A G I S F D A N L R N Q I V T E I Y - R Q G P E G L - - -
 
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