fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G66380.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt002112 not found in 272aa AT1G66370.1 1st_not 0.628158844 II
Pt001715 not found in 223aa AT1G66380.1 not_1st 0.606498194 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G66380.1     MEGSSKGLRKGAWTAEEDSLLRQCIGKYGEGKWHQVPLRAGLNRCRKSCRLRWLNYLKPS
pt001715_POPTR_ -MVGSLGVRKGAWTEEEDILLRKCVEKYGEGRWHEVPSRAGLNRCRKSCRMRWLNYLKPN
pt002112_POPTR_ -MVSLLGVRKGAWTEEEDILLRKCVEKYGEGRWHQVPSKTGLNRCRKSCRLRWLNYLKPN
                   .  *:****** *** ***:*: *****:**:** ::**********:********.

AT1G66380.1     IKRGKFSSDEVDLLLRLHKLLGNR----WSLIAGRLPGRTANDVKNYWNTHLSKK-----
pt001715_POPTR_ VKRGQFSVDEVDLIIRLHKLLGNRQVKMWSLIAGRLSGRTANDVKNYWNSNQPKS-----
pt002112_POPTR_ IKRGQFSVDEVDLIIRLHKLLGNRQVQMWSLIAGRLPGRTANDVKNYWNTNLRKKVVSST
                :***:** *****::*********    ********.************::  *.     

AT1G66380.1     ----HEPCCKTKIKRINIITP---------------------------------------
pt001715_POPTR_ ------------ITRDNIIKPQPWKFRNL----------FCHVIQQY----------RHL
pt002112_POPTR_ EDAQTKPEAKS-ITKDNIIKPRPRNLKNLCWSRAGKGTPYINVASQYGDDLCQPYSTTAL
                            *.: ***.*                                       

AT1G66380.1     PNTPAQKV----------------------------------------------------
pt001715_POPTR_ PTLMKLKV----------------------YGGKAPAAAAAYPESSESHFVKNNAPRGIK
pt002112_POPTR_ PPSETDEVERMWWESLLDDKEINLTNNSSCLG----SGSAVNQDPIKSLFVEDNAAGGIM
                *     :*                                                    

AT1G66380.1     --DIF--------------------------------------
pt001715_POPTR_ TGDVFYEQGQNCWSDISLDADLWNLINTELDQQQPEGLQSIML
pt002112_POPTR_ IGDVFCEQGQSSWAGISFDANLRNQIVTEIYRQGPEGL-----
                  *:*
BoxShade v3.31 C (beta, 970507) Output
AT1G66380.1     M E G S S K G L R K G A W T A E E D S L L R Q C I G K Y G E G K W H Q V P L R A G L N R C R K S C R L R W L N Y L K P S
pt001715_POPTR_    - M V G S L G V R K G A W T E E E D I L L R K C V E K Y G E G R W H E V P S R A G L N R C R K S C R M R W L N Y L K P N
pt002112_POPTR_    - M V S L L G V R K G A W T E E E D I L L R K C V E K Y G E G R W H Q V P S K T G L N R C R K S C R L R W L N Y L K P N
 
AT1G66380.1     I K R G K F S S D E V D L L L R L H K L L G N R - - - - W S L I A G R L P G R T A N D V K N Y W N T H L S K K - - - - -
pt001715_POPTR_    V K R G Q F S V D E V D L I I R L H K L L G N R Q V K M W S L I A G R L S G R T A N D V K N Y W N S N Q P K S - - - - -
pt002112_POPTR_    I K R G Q F S V D E V D L I I R L H K L L G N R Q V Q M W S L I A G R L P G R T A N D V K N Y W N T N L R K K V V S S T
 
AT1G66380.1     - - - - H E P C C K T K I K R I N I I T P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt001715_POPTR_    - - - - - - - - - - - - I T R D N I I K P Q P W K F R N L - - - - - - - - - - F C H V I Q Q Y - - - - - - - - - - R H L
pt002112_POPTR_    E D A Q T K P E A K S - I T K D N I I K P R P R N L K N L C W S R A G K G T P Y I N V A S Q Y G D D L C Q P Y S T T A L
 
AT1G66380.1     P N T P A Q K V - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt001715_POPTR_    P T L M K L K V - - - - - - - - - - - - - - - - - - - - - - Y G G K A P A A A A A Y P E S S E S H F V K N N A P R G I K
pt002112_POPTR_    P P S E T D E V E R M W W E S L L D D K E I N L T N N S S C L G - - - - S G S A V N Q D P I K S L F V E D N A A G G I M
 
AT1G66380.1     - - D I F - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt001715_POPTR_    T G D V F Y E Q G Q N C W S D I S L D A D L W N L I N T E L D Q Q Q P E G L Q S I M L
pt002112_POPTR_    I G D V F C E Q G Q S S W A G I S F D A N L R N Q I V T E I Y R Q G P E G L - - - - -
 
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