fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G66380.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb008582 not found in 226aa AT3G13540.1 1st_not 0.537906137 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G66380.1     -MEGSSKGLRKGAWTA--------EEDSLL--------RQCIGKYGEGKWH---------
Sb008582_Sorbi1 EEKGSTDDAEAGGAAAGRGRRGGDEDDAEAGGVDAGGGRAAVAGRGEGGGRAVAHAAAPR
                  :**:.. . *. :*        *:*:          * .:.  ***  :         

AT1G66380.1     ---------QVPL----RAGLNRCRKSCRLR-----------------------WLNYLK
Sb008582_Sorbi1 GAAALRQELQAPVDELPQAG-HQARAHRRRRGGPHPPPPPPARQPVVADRRAAAWAN---
                         *.*:    :** ::.*   * *                       * *   

AT1G66380.1     PSIKRGKFSSDEVDLLLRL----------HKLLGNRWSLIAGRLP---------------
Sb008582_Sorbi1 -----GQRDQE----LLELAPQQEAHRAGHRPAGAHASARSSRKPPLPLPVPRRRRSSSS
                     *: ..:    **.*          *:  * : *  :.* *               

AT1G66380.1     GR--------------------------TANDV---KNYWNTHLSKKHEPCCKTKIKRIN
Sb008582_Sorbi1 GRFCRQDAGTAGSRATVCAAAATATATACAPDLAVRRRCWR-RLRHQHDGSRRRGLRWIR
                **                           * *:   :. *. :* ::*: . :  :: *.

AT1G66380.1     IITPPNTPAQKVDIF
Sb008582_Sorbi1 ---------------
BoxShade v3.31 C (beta, 970507) Output
AT1G66380.1     - M E G S S K G L R K G A W T A - - - - - - - - E E D S L L - - - - - - - - R Q C I G K Y G E G K W H - - - - - - - - -
Sb008582_Sorbi1    E E K G S T D D A E A G G A A A G R G R R G G D E D D A E A G G V D A G G G R A A V A G R G E G G G R A V A H A A A P R
 
AT1G66380.1     - - - - - - - - - Q V P L - - - - R A G L N R C R K S C R L R - - - - - - - - - - - - - - - - - - - - - - - W L N Y L K
Sb008582_Sorbi1    G A A A L R Q E L Q A P V D E L P Q A G - H Q A R A H R R R R G G P H P P P P P P A R Q P V V A D R R A A A W A N - - -
 
AT1G66380.1     P S I K R G K F S S D E V D L L L R L - - - - - - - - - - H K L L G N R W S L I A G R L P - - - - - - - - - - - - - - -
Sb008582_Sorbi1    - - - - - G Q R D Q E - - - - L L E L A P Q Q E A H R A G H R P A G A H A S A R S S R K P P L P L P V P R R R R S S S S
 
AT1G66380.1     G R - - - - - - - - - - - - - - - - - - - - - - - - - - T A N D V - - - K N Y W N T H L S K K H E P C C K T K I K R I N
Sb008582_Sorbi1    G R F C R Q D A G T A G S R A T V C A A A A T A T A T A C A P D L A V R R R C W R - R L R H Q H D G S R R R G L R W I R
 
AT1G66380.1     I I T P P N T P A Q K V D I F
Sb008582_Sorbi1    - - - - - - - - - - - - - - -
 
0