fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G66380.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm025793 not found in 168aa AT1G66380.1 not_1st 0.617328519 II
Gm018396 not found in 226aa AT1G66380.1 not_1st 0.599277978 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G66380.1     MEGSSKGLRKGAWTAEEDSLLRQCIGKYGEGKWHQVPLRAGLNRCRKSCRLRWLNYLKPS
gm025793_Glyma0 MEGSS-GVRKGTWSQIEDDLLKACVQLYGEGNWHLVPKRAGLNRCRKSCRLRWLNYLKPN
gm018396_Glyma0 MGGVA-------WTEEEDHLLKKCIQQYGEGKWHRVPILAGLNRCRKSCRLRWLNYLRPN
                * * :       *:  ** **: *:  ****:** **  ******************:*.

AT1G66380.1     IKRGKFSSDEVDLLLRLHKLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKK---------
gm025793_Glyma0 IKRGDFSEDEIDMMIRLHKLLGNRWSLIAGRLPGRTSNDVKNYWNTYARRKLHSHKKDNN
gm018396_Glyma0 IKRGNFAEEEVEMIIKLHKLLGNRWSLIAGRLPGRTANDVKNYWNCHLSKRLNA------
                ****.*:.:*::::::********************:******** :  ::         

AT1G66380.1     --HEPCCKTKIKRINIITP-----------------------------------------
gm025793_Glyma0 IEKQARAKTTVKPHEVIKP-----------------------------------------
gm018396_Glyma0 --LEAEDRPITRDVQVIRPQPRNIGSSSVKRRGGQNESATDKGVQQESSMSSLTFDASDG
                   :.  :.  :  ::* *                                         

AT1G66380.1     ---------PNT-PA---QKVDIF------------------------------------
gm025793_Glyma0 ---------GNSLIV---QKLVLVMKKVQLQYQGLGI-------------GGKLF-----
gm018396_Glyma0 QNHMLESQQDNDIYACLDQQGIVSELSMDFQLQGFEAMMNGEGSSSQWDWGDYLLDMDFY
                          *   .   *:  :                                     

AT1G66380.1     -
gm025793_Glyma0 -
gm018396_Glyma0 E
BoxShade v3.31 C (beta, 970507) Output
AT1G66380.1     M E G S S K G L R K G A W T A E E D S L L R Q C I G K Y G E G K W H Q V P L R A G L N R C R K S C R L R W L N Y L K P S
gm025793_Glyma0    M E G S S - G V R K G T W S Q I E D D L L K A C V Q L Y G E G N W H L V P K R A G L N R C R K S C R L R W L N Y L K P N
gm018396_Glyma0    M G G V A - - - - - - - W T E E E D H L L K K C I Q Q Y G E G K W H R V P I L A G L N R C R K S C R L R W L N Y L R P N
 
AT1G66380.1     I K R G K F S S D E V D L L L R L H K L L G N R W S L I A G R L P G R T A N D V K N Y W N T H L S K K - - - - - - - - -
gm025793_Glyma0    I K R G D F S E D E I D M M I R L H K L L G N R W S L I A G R L P G R T S N D V K N Y W N T Y A R R K L H S H K K D N N
gm018396_Glyma0    I K R G N F A E E E V E M I I K L H K L L G N R W S L I A G R L P G R T A N D V K N Y W N C H L S K R L N A - - - - - -
 
AT1G66380.1     - - H E P C C K T K I K R I N I I T P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm025793_Glyma0    I E K Q A R A K T T V K P H E V I K P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm018396_Glyma0    - - L E A E D R P I T R D V Q V I R P Q P R N I G S S S V K R R G G Q N E S A T D K G V Q Q E S S M S S L T F D A S D G
 
AT1G66380.1     - - - - - - - - - P N T - P A - - - Q K V D I F - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm025793_Glyma0    - - - - - - - - - G N S L I V - - - Q K L V L V M K K V Q L Q Y Q G L G I - - - - - - - - - - - - - G G K L F - - - - -
gm018396_Glyma0    Q N H M L E S Q Q D N D I Y A C L D Q Q G I V S E L S M D F Q L Q G F E A M M N G E G S S S Q W D W G D Y L L D M D F Y
 
AT1G66380.1     -
gm025793_Glyma0    -
gm018396_Glyma0    E
 
0