fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G67030.1 LENGIGLDLHLSLGP at 187/197 in AT1G67030.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm050714 GGRERGLGLDLHLSL in 170/179 AT1G67030.1 1st_1st 0.366548042 Ib
Pt019007 not found in 193aa AT1G67030.1 1st_1st 0.323843416 Ib
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G67030.1     MA---------TETSSLKLFGINLLETTSVQ---NQSSEPRPGSGS--------GSE---
pt019007_POPTR_ MA---------CNNTTLKLFGFDISENNNPTVPLDSSKSP---SGSQESETNFQSSE---
gm050714_Glyma1 MAEIEYHAKSNTNTQPLKLFGINI--SKSPE---DQTHE----AGS--------NSEPFS
                **          :. .*****:::  ...     :.: .    :**        .**   

AT1G67030.1     SRKYECQYCCREFANSQALGGHQNAHKKERQLLKRAQMLATRGLPRHHNFHPHTNPLLSA
pt019007_POPTR_ GRKYECQYCCREFANSQALGGHQNAHKKERRLLKRAQMQATRSLAAAS-YVTIPNSMFST
gm050714_Glyma1 SRKYECQYCCREFANSQALGGHQNAHKKERQLLKRAQMQAARGFVSSQ-IH---NTIISS
                .*****************************:******* *:*.:          *.::*:

AT1G67030.1     FAPLPHLLSQPHPPPHMMLSPS-----------SSSSKWLYG------EHMSS-QNAVGY
pt019007_POPTR_ FSP---------PPPHL-LDPAVVPMAAAMQEHAHSSPWFYTSYSGRMPRGGPYLNGPAS
gm050714_Glyma1 FSP------QSQPP----LS------------------WLCT------PHGGAYHSGAAF
                *:*         **    *.                  *:         : ..  .. . 

AT1G67030.1     FHG----GRGLYGGGMESMAGEVKTHGGSLPEMRRFAGDSDRSSGIKLENGIGLDLHLSL
pt019007_POPTR_ FHGRCLDGKSLVG-------SEVGLHSKVFPM-----------SGFTRED---VDHHKGL
gm050714_Glyma1 VAS----GRRIYVAAAGASITDGHGHRHPLPQFGGFNG--GEGSGGGRERGLGLDLHLSL
                . .    *: :          :   *   :*            **   *    :* * .*

AT1G67030.1     GP
pt019007_POPTR_ --
gm050714_Glyma1 --
BoxShade v3.31 C (beta, 970507) Output
AT1G67030.1     M A - - - - - - - - - T E T S S L K L F G I N L L E T T S V Q - - - N Q S S E P R P G S G S - - - - - - - - G S E - - -
pt019007_POPTR_    M A - - - - - - - - - C N N T T L K L F G F D I S E N N N P T V P L D S S K S P - - - S G S Q E S E T N F Q S S E - - -
gm050714_Glyma1    M A E I E Y H A K S N T N T Q P L K L F G I N I - - S K S P E - - - D Q T H E - - - - A G S - - - - - - - - N S E P F S
 
AT1G67030.1     S R K Y E C Q Y C C R E F A N S Q A L G G H Q N A H K K E R Q L L K R A Q M L A T R G L P R H H N F H P H T N P L L S A
pt019007_POPTR_    G R K Y E C Q Y C C R E F A N S Q A L G G H Q N A H K K E R R L L K R A Q M Q A T R S L A A A S - Y V T I P N S M F S T
gm050714_Glyma1    S R K Y E C Q Y C C R E F A N S Q A L G G H Q N A H K K E R Q L L K R A Q M Q A A R G F V S S Q - I H - - - N T I I S S
 
AT1G67030.1     F A P L P H L L S Q P H P P P H M M L S P S - - - - - - - - - - - S S S S K W L Y G - - - - - - E H M S S - Q N A V G Y
pt019007_POPTR_    F S P - - - - - - - - - P P P H L - L D P A V V P M A A A M Q E H A H S S P W F Y T S Y S G R M P R G G P Y L N G P A S
gm050714_Glyma1    F S P - - - - - - Q S Q P P - - - - L S - - - - - - - - - - - - - - - - - - W L C T - - - - - - P H G G A Y H S G A A F
 
AT1G67030.1     F H G - - - - G R G L Y G G G M E S M A G E V K T H G G S L P E M R R F A G D S D R S S G I K L E N G I G L D L H L S L
pt019007_POPTR_    F H G R C L D G K S L V G - - - - - - - S E V G L H S K V F P M - - - - - - - - - - - S G F T R E D - - - V D H H K G L
gm050714_Glyma1    V A S - - - - G R R I Y V A A A G A S I T D G H G H R H P L P Q F G G F N G - - G E G S G G G R E R G L G L D L H L S L
 
AT1G67030.1     G P
pt019007_POPTR_    - -
gm050714_Glyma1    - -
 
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