fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G67030.1 LENGIGLDLHLSLGP at 187/197 in AT1G67030.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt019007 not found in 193aa AT1G67030.1 1st_1st 0.323843416 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G67030.1     MATETSSLKLFGINLLETT--SVQNQSSEPRPGSG------SGSESRKYECQYCCREFAN
pt019007_POPTR_ MACNNTTLKLFGFDISENNNPTVPLDSSKSPSGSQESETNFQSSEGRKYECQYCCREFAN
                ** :.::*****::: *..  :*  :**:. .**       ..**.**************

AT1G67030.1     SQALGGHQNAHKKERQLLKRAQMLATRGLPRHHNFHPHTNPLLSAFAPLPHLLSQPHPPP
pt019007_POPTR_ SQALGGHQNAHKKERRLLKRAQMQATRSLAA-ASYVTIPNSMFSTFSP---------PPP
                ***************:******* ***.*.   .: . .*.::*:*:*         ***

AT1G67030.1     HMM----------LSPSSSSSKWLYGEHMSSQ-------NAVGYFHG----GRGLYGGGM
pt019007_POPTR_ HLLDPAVVPMAAAMQEHAHSSPWFYTSYSGRMPRGGPYLNGPASFHGRCLDGKSLVG---
                *::          :.  : ** *:* .: .         *. . ***    *:.* *   

AT1G67030.1     ESMAGEVKTHGGSLPEMRRFAGDSDRSSGIKLENGIGLDLHLSLGP
pt019007_POPTR_ ----SEVGLHSKVFP-----------MSGFTRED---VDHHKGL--
                    .**  *.  :*            **:. *:   :* * .*
BoxShade v3.31 C (beta, 970507) Output
AT1G67030.1     M A T E T S S L K L F G I N L L E T T - - S V Q N Q S S E P R P G S G - - - - - - S G S E S R K Y E C Q Y C C R E F A N
pt019007_POPTR_    M A C N N T T L K L F G F D I S E N N N P T V P L D S S K S P S G S Q E S E T N F Q S S E G R K Y E C Q Y C C R E F A N
 
AT1G67030.1     S Q A L G G H Q N A H K K E R Q L L K R A Q M L A T R G L P R H H N F H P H T N P L L S A F A P L P H L L S Q P H P P P
pt019007_POPTR_    S Q A L G G H Q N A H K K E R R L L K R A Q M Q A T R S L A A - A S Y V T I P N S M F S T F S P - - - - - - - - - P P P
 
AT1G67030.1     H M M - - - - - - - - - - L S P S S S S S K W L Y G E H M S S Q - - - - - - - N A V G Y F H G - - - - G R G L Y G G G M
pt019007_POPTR_    H L L D P A V V P M A A A M Q E H A H S S P W F Y T S Y S G R M P R G G P Y L N G P A S F H G R C L D G K S L V G - - -
 
AT1G67030.1     E S M A G E V K T H G G S L P E M R R F A G D S D R S S G I K L E N G I G L D L H L S L G P
pt019007_POPTR_    - - - - S E V G L H S K V F P - - - - - - - - - - - M S G F T R E D - - - V D H H K G L - -
 
0