fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G68200.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm028989 not found in 285aa AT1G68200.1 1st_1st 0.482965931 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G68200.1     MENKIAPFSYSGSSAGNSSSGGVVSSSLYSDQLYKSTRNIMQQRQDMVNREALCYTRLHE
gm028989_Glyma1 ----MYPYSES-----------------------------IQKHQDMVNRQSMCLNRLVE
                    : *:* *                             :*::******:::* .** *

AT1G68200.1     ASLEAEALRLENTELRSMNLRLKNELNSLIRSSIQNRF-------DHRSPLRMLSNLSIG
gm028989_Glyma1 TSKEVEALREENGLLRAANKELQKQLHLVIQASLENHYGGGDGGSSGQTQPTLFNNYADW
                :* *.**** **  **: * .*:::*: :*::*::*::       . ::   ::.* :  

AT1G68200.1     GNDADEVENQNRTVNRD--DVNDKSPTSVMENE---DLNRSSLPKSISVRSNGYSKASQG
gm028989_Glyma1 NNNNLNIMNNNNSNNKELQEISEESPTSVIENNNVVEVERFSLPKSISVRSNGYLKTAQS
                .*:  :: *:*.: *::  ::.::*****:**:   :::* ************* *::*.

AT1G68200.1     GGGAAAQSG--------KPRGTVTKPGTCGQVSTTQKVYVRGGGKKEDQEEEIEVEVYNQ
gm028989_Glyma1 AALAPNNSNATRNKGATRPRASATPP------EPVQKVYVRGGQK---EEEPLEMIVYNQ
                .. *. :*.        :**.:.* *      ...******** *   :** :*: ****

AT1G68200.1     GMTKTELCNKWQETGTCPYGDHCQFAHGIKELRPVIRHPRYKTEVCRMVLAGDNCPYGHR
gm028989_Glyma1 GMFKTELCNKWQETGTCPYGDHCQFAHGIGELRPVIRHPRYKTEVCRMVLAGVVCPYGHR
                ** ************************** **********************  ******

AT1G68200.1     CHFRHSLSEQEKLVAAGFKPKSSLKLIT
gm028989_Glyma1 CHFRHALTEQEKAVVSQPKPR-SMKLER
                *****:*:**** *.:  **: *:**
BoxShade v3.31 C (beta, 970507) Output
AT1G68200.1     M E N K I A P F S Y S G S S A G N S S S G G V V S S S L Y S D Q L Y K S T R N I M Q Q R Q D M V N R E A L C Y T R L H E
gm028989_Glyma1    - - - - M Y P Y S E S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - I Q K H Q D M V N R Q S M C L N R L V E
 
AT1G68200.1     A S L E A E A L R L E N T E L R S M N L R L K N E L N S L I R S S I Q N R F - - - - - - - D H R S P L R M L S N L S I G
gm028989_Glyma1    T S K E V E A L R E E N G L L R A A N K E L Q K Q L H L V I Q A S L E N H Y G G G D G G S S G Q T Q P T L F N N Y A D W
 
AT1G68200.1     G N D A D E V E N Q N R T V N R D - - D V N D K S P T S V M E N E - - - D L N R S S L P K S I S V R S N G Y S K A S Q G
gm028989_Glyma1    N N N N L N I M N N N N S N N K E L Q E I S E E S P T S V I E N N N V V E V E R F S L P K S I S V R S N G Y L K T A Q S
 
AT1G68200.1     G G G A A A Q S G - - - - - - - - K P R G T V T K P G T C G Q V S T T Q K V Y V R G G G K K E D Q E E E I E V E V Y N Q
gm028989_Glyma1    A A L A P N N S N A T R N K G A T R P R A S A T P P - - - - - - E P V Q K V Y V R G G Q K - - - E E E P L E M I V Y N Q
 
AT1G68200.1     G M T K T E L C N K W Q E T G T C P Y G D H C Q F A H G I K E L R P V I R H P R Y K T E V C R M V L A G D N C P Y G H R
gm028989_Glyma1    G M F K T E L C N K W Q E T G T C P Y G D H C Q F A H G I G E L R P V I R H P R Y K T E V C R M V L A G V V C P Y G H R
 
AT1G68200.1     C H F R H S L S E Q E K L V A A G F K P K S S L K L I T
gm028989_Glyma1    C H F R H A L T E Q E K A V V S Q P K P R - S M K L E R
 
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