fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G68200.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm028989 not found in 285aa AT1G68200.1 1st_1st 0.482965931 Ia
Gm054457 not found in 305aa AT1G68200.1 not_1st 0.422845691 II
Pt033858 not found in 266aa AT1G68200.2 1st_not 0.442885771 II
Sm006968 not found in 119aa AT1G68200.1 1st_1st 0.200400801 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G68200.1     MENKIAPFSYSGSSAGNSSSGGVVSSSLYSDQLYKSTRNIMQQRQDMVNREALCYTRLHE
pt033858_POPTR_ -----------------------------------------MRHQDLINRSALCLARLRE
gm028989_Glyma1 ----MYPYSES-----------------------------IQKHQDMVNRQSMCLNRLVE
Sm006968_Selmo1 ------------------------------------------------------------
gm054457_Glyma2 -----------------------------------------MHNKDTCSPSS---NGGFG
                                                                            

AT1G68200.1     ASLEAEALRLENTELRSMNLRLKNELNSLIRSSIQNRF------DHRSP------LRMLS
pt033858_POPTR_ VTVEMECLRQDNADLRSINRELNNQLSVLIQASLHKHY--ND--STRTPFDIDIGFHNLC
gm028989_Glyma1 TSKEVEALREENGLLRAANKELQKQLHLVIQASLENHYGGGD------------------
Sm006968_Selmo1 ----------------------------------------------------------MA
gm054457_Glyma2 GGASAGQMPSTGGLYSSLYSALSSENLPSLSASCSNSSGGGEAPGHGEP------SKHVS
                                                                            

AT1G68200.1     -----NLSI-GGND------------------------ADEVENQNRTVNRDDVN-----
pt033858_POPTR_ -----NISS-GGGGGHDMCEE---------------------------------------
gm028989_Glyma1 ----------GGSSGQTQPT-------------LFNNYADWNNNNLNIMNNNNSNNKELQ
Sm006968_Selmo1 ------------------------------------------------------------
gm054457_Glyma2 ESPGGNFEGGGGSEGGEWPAPSREQGAPEAAAPRHPGFAGESLRRRRLIRPDATD----A
                                                                            

AT1G68200.1     ---DKSPTSVMENE---DLNRSSLPKSISVRSNGYSKASQGGGGAAAQSG--------KP
pt033858_POPTR_ ---DESPTSVMEAGGD-DRERISLPKSISVRSNSYSKRNQEQAASASVTRA-------IT
gm028989_Glyma1 EISEESPTSVIENNNVVEVERFSLPKSISVRSNGYLKTAQSAALAPNNSNATRNKGATRP
Sm006968_Selmo1 ---EESDAS---------------------------------------------------
gm054457_Glyma2 EVSDESPTSVIENNNVVEVERFSLPKSISVRSNGYLKMSQSAALAPNNNNATRNKGATRP
                   ::* :*                                                   

AT1G68200.1     RGTVTKPGTCGQVSTTQKVYVRGGGKKEDQEEEIEVEVYNQGMTKTELCNKWQETGTCPY
pt033858_POPTR_ RLRTPSP------LNTAKVYVRRG---KKQEEPLELEVYNQGMFKTELCNKWQETGACLY
gm028989_Glyma1 RASATPP------EPVQKVYVRGG---QKEEEPLEMIVYNQGMFKTELCNKWQETGTCPY
Sm006968_Selmo1 -----------------KLY------------------------KTELCRSWEETGSCRY
gm054457_Glyma2 RASATPP------EPVQKVYVRGG---EKEEEPLEMIVYNQGMFKTELCNKWQETGTCPY
                                 *:*                        *****..*:***:* *

AT1G68200.1     GDHCQFAHGIKELRPVIRHPRYKTEVCRMVLAGDNCPYGHRCHFRHSLSEQE--------
pt033858_POPTR_ GNHCQFAHGIEELRPVIRHPRYKTEVCKMVLAGGICPYGHRCHFRHALTEQD--------
gm028989_Glyma1 GDHCQFAHGIGELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTEQE--------
Sm006968_Selmo1 GNKCQFAHGKEDLRPVNRHPKYKTEVCRTFSAAGTCPYGKRCRFIHATPKLSDVKLPPLV
gm054457_Glyma2 GDHCQFAHGIGELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTEQE--------
                *::******  :**** ***:******: . *.  ****:**:* *: .: .        

AT1G68200.1     -------KLV----AAGFKP-KSSLKLIT-------
pt033858_POPTR_ -------RFL-----SHIKPGKSSLTDENRIPRIAN
gm028989_Glyma1 -------KAV----VSQPKP-R-SMKLER-------
Sm006968_Selmo1 APAMNLTKLLLHDNAAAMAP-RSRLPVFREICL---
gm054457_Glyma2 -------KAV----VSQPKP-R-SMKLER-------
                       : :     :   * :  :
BoxShade v3.31 C (beta, 970507) Output
AT1G68200.1     M E N K I A P F S Y S G S S A G N S S S G G V V S S S L Y S D Q L Y K S T R N I M Q Q R Q D M V N R E A L C Y T R L H E
pt033858_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M R H Q D L I N R S A L C L A R L R E
gm028989_Glyma1    - - - - M Y P Y S E S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - I Q K H Q D M V N R Q S M C L N R L V E
Sm006968_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm054457_Glyma2    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M H N K D T C S P S S - - - N G G F G
 
AT1G68200.1     A S L E A E A L R L E N T E L R S M N L R L K N E L N S L I R S S I Q N R F - - - - - - D H R S P - - - - - - L R M L S
pt033858_POPTR_    V T V E M E C L R Q D N A D L R S I N R E L N N Q L S V L I Q A S L H K H Y - - N D - - S T R T P F D I D I G F H N L C
gm028989_Glyma1    T S K E V E A L R E E N G L L R A A N K E L Q K Q L H L V I Q A S L E N H Y G G G D - - - - - - - - - - - - - - - - - -
Sm006968_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A
gm054457_Glyma2    G G A S A G Q M P S T G G L Y S S L Y S A L S S E N L P S L S A S C S N S S G G G E A P G H G E P - - - - - - S K H V S
 
AT1G68200.1     - - - - - N L S I - G G N D - - - - - - - - - - - - - - - - - - - - - - - - A D E V E N Q N R T V N R D D V N - - - - -
pt033858_POPTR_    - - - - - N I S S - G G G G G H D M C E E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm028989_Glyma1    - - - - - - - - - - G G S S G Q T Q P T - - - - - - - - - - - - - L F N N Y A D W N N N N L N I M N N N N S N N K E L Q
Sm006968_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm054457_Glyma2    E S P G G N F E G G G G S E G G E W P A P S R E Q G A P E A A A P R H P G F A G E S L R R R R L I R P D A T D - - - - A
 
AT1G68200.1     - - - D K S P T S V M E N E - - - D L N R S S L P K S I S V R S N G Y S K A S Q G G G G A A A Q S G - - - - - - - - K P
pt033858_POPTR_    - - - D E S P T S V M E A G G D - D R E R I S L P K S I S V R S N S Y S K R N Q E Q A A S A S V T R A - - - - - - - I T
gm028989_Glyma1    E I S E E S P T S V I E N N N V V E V E R F S L P K S I S V R S N G Y L K T A Q S A A L A P N N S N A T R N K G A T R P
Sm006968_Selmo1    - - - E E S D A S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm054457_Glyma2    E V S D E S P T S V I E N N N V V E V E R F S L P K S I S V R S N G Y L K M S Q S A A L A P N N N N A T R N K G A T R P
 
AT1G68200.1     R G T V T K P G T C G Q V S T T Q K V Y V R G G G K K E D Q E E E I E V E V Y N Q G M T K T E L C N K W Q E T G T C P Y
pt033858_POPTR_    R L R T P S P - - - - - - L N T A K V Y V R R G - - - K K Q E E P L E L E V Y N Q G M F K T E L C N K W Q E T G A C L Y
gm028989_Glyma1    R A S A T P P - - - - - - E P V Q K V Y V R G G - - - Q K E E E P L E M I V Y N Q G M F K T E L C N K W Q E T G T C P Y
Sm006968_Selmo1    - - - - - - - - - - - - - - - - - K L Y - - - - - - - - - - - - - - - - - - - - - - - - K T E L C R S W E E T G S C R Y
gm054457_Glyma2    R A S A T P P - - - - - - E P V Q K V Y V R G G - - - E K E E E P L E M I V Y N Q G M F K T E L C N K W Q E T G T C P Y
 
AT1G68200.1     G D H C Q F A H G I K E L R P V I R H P R Y K T E V C R M V L A G D N C P Y G H R C H F R H S L S E Q E - - - - - - - -
pt033858_POPTR_    G N H C Q F A H G I E E L R P V I R H P R Y K T E V C K M V L A G G I C P Y G H R C H F R H A L T E Q D - - - - - - - -
gm028989_Glyma1    G D H C Q F A H G I G E L R P V I R H P R Y K T E V C R M V L A G V V C P Y G H R C H F R H A L T E Q E - - - - - - - -
Sm006968_Selmo1    G N K C Q F A H G K E D L R P V N R H P K Y K T E V C R T F S A A G T C P Y G K R C R F I H A T P K L S D V K L P P L V
gm054457_Glyma2    G D H C Q F A H G I G E L R P V I R H P R Y K T E V C R M V L A G V V C P Y G H R C H F R H A L T E Q E - - - - - - - -
 
AT1G68200.1     - - - - - - - K L V - - - - A A G F K P - K S S L K L I T - - - - - - -
pt033858_POPTR_    - - - - - - - R F L - - - - - S H I K P G K S S L T D E N R I P R I A N
gm028989_Glyma1    - - - - - - - K A V - - - - V S Q P K P - R - S M K L E R - - - - - - -
Sm006968_Selmo1    A P A M N L T K L L L H D N A A A M A P - R S R L P V F R E I C L - - -
gm054457_Glyma2    - - - - - - - K A V - - - - V S Q P K P - R - S M K L E R - - - - - - -
 
0