fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G68200.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt033858 not found in 266aa AT1G68200.2 1st_not 0.442885771 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G68200.1     MENKIAPFSYSGSSAGNSSSGGVVSSSLYSDQLYKSTRNIMQQRQDMVNREALCYTRLHE
pt033858_POPTR_ -----------------------------------------MRHQDLINRSALCLARLRE
                                                          ::**::**.*** :**:*

AT1G68200.1     ASLEAEALRLENTELRSMNLRLKNELNSLIRSSIQNRFDH--RSPLRM------LSNLSI
pt033858_POPTR_ VTVEMECLRQDNADLRSINRELNNQLSVLIQASLHKHYNDSTRTPFDIDIGFHNLCNISS
                .::* *.** :*::***:* .*:*:*. **::*::::::.  *:*: :      *.*:* 

AT1G68200.1     GGNDADEVENQNRTVNRDDVNDKSPTSVME--NEDLNRSSLPKSISVRSNGYSKASQGGG
pt033858_POPTR_ GGGGGHDMCEE----------DESPTSVMEAGGDDRERISLPKSISVRSNSYSKRNQ---
                **....:: ::          *:*******  .:* :* ***********.*** .*   

AT1G68200.1     GAAAQSGKPRGTVTKPGTCGQVSTTQKVYVRGGGKKEDQEEEIEVEVYNQGMTKTELCNK
pt033858_POPTR_ -EQAASASVTRAITRLRTPSPLNTA-KVYVRRGKK---QEEPLELEVYNQGMFKTELCNK
                   * *..   ::*:  * . :.*: ***** * *   *** :*:******* *******

AT1G68200.1     WQETGTCPYGDHCQFAHGIKELRPVIRHPRYKTEVCRMVLAGDNCPYGHRCHFRHSLSEQ
pt033858_POPTR_ WQETGACLYGNHCQFAHGIEELRPVIRHPRYKTEVCKMVLAGGICPYGHRCHFRHALTEQ
                *****:* **:********:****************:*****. ***********:*:**

AT1G68200.1     EKLVAAGFKP-KSSL-------KLIT
pt033858_POPTR_ DRFLSH-IKPGKSSLTDENRIPRIAN
                :::::  :** ****       :: .
BoxShade v3.31 C (beta, 970507) Output
AT1G68200.1     M E N K I A P F S Y S G S S A G N S S S G G V V S S S L Y S D Q L Y K S T R N I M Q Q R Q D M V N R E A L C Y T R L H E
pt033858_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M R H Q D L I N R S A L C L A R L R E
 
AT1G68200.1     A S L E A E A L R L E N T E L R S M N L R L K N E L N S L I R S S I Q N R F D H - - R S P L R M - - - - - - L S N L S I
pt033858_POPTR_    V T V E M E C L R Q D N A D L R S I N R E L N N Q L S V L I Q A S L H K H Y N D S T R T P F D I D I G F H N L C N I S S
 
AT1G68200.1     G G N D A D E V E N Q N R T V N R D D V N D K S P T S V M E - - N E D L N R S S L P K S I S V R S N G Y S K A S Q G G G
pt033858_POPTR_    G G G G G H D M C E E - - - - - - - - - - D E S P T S V M E A G G D D R E R I S L P K S I S V R S N S Y S K R N Q - - -
 
AT1G68200.1     G A A A Q S G K P R G T V T K P G T C G Q V S T T Q K V Y V R G G G K K E D Q E E E I E V E V Y N Q G M T K T E L C N K
pt033858_POPTR_    - E Q A A S A S V T R A I T R L R T P S P L N T A - K V Y V R R G K K - - - Q E E P L E L E V Y N Q G M F K T E L C N K
 
AT1G68200.1     W Q E T G T C P Y G D H C Q F A H G I K E L R P V I R H P R Y K T E V C R M V L A G D N C P Y G H R C H F R H S L S E Q
pt033858_POPTR_    W Q E T G A C L Y G N H C Q F A H G I E E L R P V I R H P R Y K T E V C K M V L A G G I C P Y G H R C H F R H A L T E Q
 
AT1G68200.1     E K L V A A G F K P - K S S L - - - - - - - K L I T
pt033858_POPTR_    D R F L S H - I K P G K S S L T D E N R I P R I A N
 
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