fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G68200.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm054457 not found in 305aa AT1G68200.1 not_1st 0.422845691 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G68200.1     MENK--IAPFSY----SGSSAGNSSSGGVVSSSLYSDQLYKSTRNIMQQRQDMVNREALC
gm054457_Glyma2 MHNKDTCSPSSNGGFGGGASAGQMPSTGGLYSSLYS------------------------
                *.**   :* *     .*:***: .* * : *****                        

AT1G68200.1     YTRLHEASLEAEALRLENTELRSMNLRLKNELNSLIRSSIQNRFDHRSPLRMLSNLSIGG
gm054457_Glyma2 ------------ALSSEN--LPSLSASCSNS------SGGGEAPGHGEPSKHVSE-SPGG
                            **  **  * *:.   .*.      *.  :  .* .* : :*: * **

AT1G68200.1     N-------------------------------DADEVENQNRTVNRD----DVNDKSPTS
gm054457_Glyma2 NFEGGGGSEGGEWPAPSREQGAPEAAAPRHPGFAGESLRRRRLIRPDATDAEVSDESPTS
                *                                *.*  .:.* :. *    :*.*:****

AT1G68200.1     VMENE---DLNRSSLPKSISVRSNGYSKASQGGGGAAAQSG--------KPRGTVTKPGT
gm054457_Glyma2 VIENNNVVEVERFSLPKSISVRSNGYLKMSQSAALAPNNNNATRNKGATRPRASATPP--
                *:**:   :::* ************* * **... *. :..        :**.:.* *  

AT1G68200.1     CGQVSTTQKVYVRGGGKKEDQEEEIEVEVYNQGMTKTELCNKWQETGTCPYGDHCQFAHG
gm054457_Glyma2 ----EPVQKVYVRGG---EKEEEPLEMIVYNQGMFKTELCNKWQETGTCPYGDHCQFAHG
                    ...********   *.:** :*: ****** *************************

AT1G68200.1     IKELRPVIRHPRYKTEVCRMVLAGDNCPYGHRCHFRHSLSEQEKLVAAGFKPKSSLKLIT
gm054457_Glyma2 IGELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTEQEKAVVSQPKPR-SMKLER
                * **********************  ***********:*:**** *.:  **: *:**
BoxShade v3.31 C (beta, 970507) Output
AT1G68200.1     M E N K - - I A P F S Y - - - - S G S S A G N S S S G G V V S S S L Y S D Q L Y K S T R N I M Q Q R Q D M V N R E A L C
gm054457_Glyma2    M H N K D T C S P S S N G G F G G G A S A G Q M P S T G G L Y S S L Y S - - - - - - - - - - - - - - - - - - - - - - - -
 
AT1G68200.1     Y T R L H E A S L E A E A L R L E N T E L R S M N L R L K N E L N S L I R S S I Q N R F D H R S P L R M L S N L S I G G
gm054457_Glyma2    - - - - - - - - - - - - A L S S E N - - L P S L S A S C S N S - - - - - - S G G G E A P G H G E P S K H V S E - S P G G
 
AT1G68200.1     N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - D A D E V E N Q N R T V N R D - - - - D V N D K S P T S
gm054457_Glyma2    N F E G G G G S E G G E W P A P S R E Q G A P E A A A P R H P G F A G E S L R R R R L I R P D A T D A E V S D E S P T S
 
AT1G68200.1     V M E N E - - - D L N R S S L P K S I S V R S N G Y S K A S Q G G G G A A A Q S G - - - - - - - - K P R G T V T K P G T
gm054457_Glyma2    V I E N N N V V E V E R F S L P K S I S V R S N G Y L K M S Q S A A L A P N N N N A T R N K G A T R P R A S A T P P - -
 
AT1G68200.1     C G Q V S T T Q K V Y V R G G G K K E D Q E E E I E V E V Y N Q G M T K T E L C N K W Q E T G T C P Y G D H C Q F A H G
gm054457_Glyma2    - - - - E P V Q K V Y V R G G - - - E K E E E P L E M I V Y N Q G M F K T E L C N K W Q E T G T C P Y G D H C Q F A H G
 
AT1G68200.1     I K E L R P V I R H P R Y K T E V C R M V L A G D N C P Y G H R C H F R H S L S E Q E K L V A A G F K P K S S L K L I T
gm054457_Glyma2    I G E L R P V I R H P R Y K T E V C R M V L A G V V C P Y G H R C H F R H A L T E Q E K A V V S Q P K P R - S M K L E R
 
0