fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G68200.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm028989 not found in 285aa AT1G68200.1 1st_1st 0.482965931 Ia
Gm054457 not found in 305aa AT1G68200.1 not_1st 0.422845691 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G68200.1     MENKIAPFSYSGSSAGNSSSGGVVSSSLYSDQLYKSTRNIMQQRQDMVNREALCYTRLHE
gm054457_Glyma2 -----------------------------------------MHNKDTCSPSS---NGGFG
gm028989_Glyma1 ----MYPYSES-----------------------------IQKHQDMVNRQSMCLNRLVE
                                                          :.:*  . .:   .    

AT1G68200.1     ASLEAEALRLENTELRSMNLRLKNELNSLIRSSIQNRF------DHRSPLRMLS-----N
gm054457_Glyma2 GGASAGQMPSTGGLYSSLYSALSSENLPSLSASCSNSSGGGEAPGHGEPSKHVSESPGGN
gm028989_Glyma1 TSKEVEALREENGLLRAANKELQKQLHLVIQASLENHYGGGD------------------
                 . ..  :   .    :    *..:    : :* .*                        

AT1G68200.1     LSI-GGND------------------------ADEVENQNRTVNRDDVN--------DKS
gm054457_Glyma2 FEGGGGSEGGEWPAPSREQGAPEAAAPRHPGFAGESLRRRRLIRPDATD----AEVSDES
gm028989_Glyma1 ----GGSSGQTQPT-------------LFNNYADWNNNNLNIMNNNNSNNKELQEISEES
                    **..                        *.   .. . :. :  :        ::*

AT1G68200.1     PTSVMENE---DLNRSSLPKSISVRSNGYSKASQGGGGAAAQSG--------KPRGTVTK
gm054457_Glyma2 PTSVIENNNVVEVERFSLPKSISVRSNGYLKMSQSAALAPNNNNATRNKGATRPRASATP
gm028989_Glyma1 PTSVIENNNVVEVERFSLPKSISVRSNGYLKTAQSAALAPNNSNATRNKGATRPRASATP
                ****:**:   :::* ************* * :*... *. :..        :**.:.* 

AT1G68200.1     PGTCGQVSTTQKVYVRGGGKKEDQEEEIEVEVYNQGMTKTELCNKWQETGTCPYGDHCQF
gm054457_Glyma2 P------EPVQKVYVRGG---EKEEEPLEMIVYNQGMFKTELCNKWQETGTCPYGDHCQF
gm028989_Glyma1 P------EPVQKVYVRGG---QKEEEPLEMIVYNQGMFKTELCNKWQETGTCPYGDHCQF
                *      ...********   :.:** :*: ****** **********************

AT1G68200.1     AHGIKELRPVIRHPRYKTEVCRMVLAGDNCPYGHRCHFRHSLSEQEKLVAAGFKPKSSLK
gm054457_Glyma2 AHGIGELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTEQEKAVVSQPKPR-SMK
gm028989_Glyma1 AHGIGELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTEQEKAVVSQPKPR-SMK
                **** **********************  ***********:*:**** *.:  **: *:*

AT1G68200.1     LIT
gm054457_Glyma2 LER
gm028989_Glyma1 LER
                *
BoxShade v3.31 C (beta, 970507) Output
AT1G68200.1     M E N K I A P F S Y S G S S A G N S S S G G V V S S S L Y S D Q L Y K S T R N I M Q Q R Q D M V N R E A L C Y T R L H E
gm054457_Glyma2    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M H N K D T C S P S S - - - N G G F G
gm028989_Glyma1    - - - - M Y P Y S E S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - I Q K H Q D M V N R Q S M C L N R L V E
 
AT1G68200.1     A S L E A E A L R L E N T E L R S M N L R L K N E L N S L I R S S I Q N R F - - - - - - D H R S P L R M L S - - - - - N
gm054457_Glyma2    G G A S A G Q M P S T G G L Y S S L Y S A L S S E N L P S L S A S C S N S S G G G E A P G H G E P S K H V S E S P G G N
gm028989_Glyma1    T S K E V E A L R E E N G L L R A A N K E L Q K Q L H L V I Q A S L E N H Y G G G D - - - - - - - - - - - - - - - - - -
 
AT1G68200.1     L S I - G G N D - - - - - - - - - - - - - - - - - - - - - - - - A D E V E N Q N R T V N R D D V N - - - - - - - - D K S
gm054457_Glyma2    F E G G G G S E G G E W P A P S R E Q G A P E A A A P R H P G F A G E S L R R R R L I R P D A T D - - - - A E V S D E S
gm028989_Glyma1    - - - - G G S S G Q T Q P T - - - - - - - - - - - - - L F N N Y A D W N N N N L N I M N N N N S N N K E L Q E I S E E S
 
AT1G68200.1     P T S V M E N E - - - D L N R S S L P K S I S V R S N G Y S K A S Q G G G G A A A Q S G - - - - - - - - K P R G T V T K
gm054457_Glyma2    P T S V I E N N N V V E V E R F S L P K S I S V R S N G Y L K M S Q S A A L A P N N N N A T R N K G A T R P R A S A T P
gm028989_Glyma1    P T S V I E N N N V V E V E R F S L P K S I S V R S N G Y L K T A Q S A A L A P N N S N A T R N K G A T R P R A S A T P
 
AT1G68200.1     P G T C G Q V S T T Q K V Y V R G G G K K E D Q E E E I E V E V Y N Q G M T K T E L C N K W Q E T G T C P Y G D H C Q F
gm054457_Glyma2    P - - - - - - E P V Q K V Y V R G G - - - E K E E E P L E M I V Y N Q G M F K T E L C N K W Q E T G T C P Y G D H C Q F
gm028989_Glyma1    P - - - - - - E P V Q K V Y V R G G - - - Q K E E E P L E M I V Y N Q G M F K T E L C N K W Q E T G T C P Y G D H C Q F
 
AT1G68200.1     A H G I K E L R P V I R H P R Y K T E V C R M V L A G D N C P Y G H R C H F R H S L S E Q E K L V A A G F K P K S S L K
gm054457_Glyma2    A H G I G E L R P V I R H P R Y K T E V C R M V L A G V V C P Y G H R C H F R H A L T E Q E K A V V S Q P K P R - S M K
gm028989_Glyma1    A H G I G E L R P V I R H P R Y K T E V C R M V L A G V V C P Y G H R C H F R H A L T E Q E K A V V S Q P K P R - S M K
 
AT1G68200.1     L I T
gm054457_Glyma2    L E R
gm028989_Glyma1    L E R
 
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