fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G68320.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm020185 not found in 312aa AT1G25340.1 1st_not 0.438432835 II
Gm013215 not found in 317aa AT1G68320.1 not_1st 0.434701492 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G68320.1     MENSMKKKKSFKES--EDEELRRGPWTLEEDTLLTNYILHNGEGRWNHVAKCAGLKRTGK
gm020185_Glyma0 ----MSTSKSVSSSSEDDNELRRGPWTLEEDNLLSQYIFNHGEGRWNLLAKRSGLKRTGK
gm013215_Glyma0 ----MSTSKSVSSSSEDDNELRRGPWTLEEDNLLSQYISSHGEGRWNLLAKRSGLKRTGK
                    *...**...*  :*:************.**::**  :****** :** :*******

AT1G68320.1     SCRLRWLNYLKPDIRRGNLTPQEQLLILELHSKWGNRWSKIAQYLPGRTDNEIKNYWRTR
gm020185_Glyma0 SCRLRWLNYLKPDVKRGNLTPQEQLIILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTR
gm013215_Glyma0 SCRLRWLNYLKPDVKRGNLTPQEQLIILELHSKWGNRWSKIAQNLPGRTDNEIKNYWRTR
                *************::**********:***************** ****************

AT1G68320.1     VQKQARQLNIESNSDKFFDAVRSFWVPRLIEKMEQNSSTTTTYCCPQNNNNNSLLLPSQS
gm020185_Glyma0 IQKQARHLKIYTDSREFQELVRRFWMPRLLQKAKESSSSNMSI------QNQAIPMP---
gm013215_Glyma0 IQKQARHLKIDTDSREFQELVRRFWMPRLLQKAKESSSSAMSI------QNQATPMP---
                :*****:*:* ::* :* : ** **:***::* ::.**:  :       :*::  :*   

AT1G68320.1     HDSLSMQKDI---------DYSG--------------FSNIDGSSSTSTCMS-----HLT
gm020185_Glyma0 FDYVSQHLTVGTIP-----PWQGPCMNEAGPTYMDQHEQNSDSEHNNGSCISLSESANIP
gm013215_Glyma0 FDGVSQHSTVGTIPSHSHTPWQGPCMNEAGPTYMDQHEQNSDSEHNNGSCISLSESANFP
                .* :* :  :          :.*               .* *.. ...:*:*     ::.

AT1G68320.1     TVP-HFMDQSNTNIIDGSMCFHEGNVQEFGGYVPGMEDYMVNSDI-SMECHVADGYSAYE
gm020185_Glyma0 KVPQHFGHTTITQ-------FHALNTNDFGTFT--YEGYNVNNNVYEMDNFKTTTTWVAE
gm013215_Glyma0 KVPQHFGRTTITQ-------YHALNNNDFGTFT--YDGYNVSNNVYEMDNFKTPTTRVAE
                .** **   : *:       :*  * ::** :.   :.* *..:: .*: . :    . *

AT1G68320.1     DVTQDP-------------------MWNVDDIWQFRE---
gm020185_Glyma0 D-AQYPIGDCQMVGSNWVNNDFACNMWNMDELWQFSKLQK
gm013215_Glyma0 D-AQYPTGDCQMVGSNWVNSDFACNMWNMDELWQFSKLQK
                * :* *                   ***:*::*** :
BoxShade v3.31 C (beta, 970507) Output
AT1G68320.1     M E N S M K K K K S F K E S - - E D E E L R R G P W T L E E D T L L T N Y I L H N G E G R W N H V A K C A G L K R T G K
gm020185_Glyma0    - - - - M S T S K S V S S S S E D D N E L R R G P W T L E E D N L L S Q Y I F N H G E G R W N L L A K R S G L K R T G K
gm013215_Glyma0    - - - - M S T S K S V S S S S E D D N E L R R G P W T L E E D N L L S Q Y I S S H G E G R W N L L A K R S G L K R T G K
 
AT1G68320.1     S C R L R W L N Y L K P D I R R G N L T P Q E Q L L I L E L H S K W G N R W S K I A Q Y L P G R T D N E I K N Y W R T R
gm020185_Glyma0    S C R L R W L N Y L K P D V K R G N L T P Q E Q L I I L E L H S K W G N R W S K I A Q H L P G R T D N E I K N Y W R T R
gm013215_Glyma0    S C R L R W L N Y L K P D V K R G N L T P Q E Q L I I L E L H S K W G N R W S K I A Q N L P G R T D N E I K N Y W R T R
 
AT1G68320.1     V Q K Q A R Q L N I E S N S D K F F D A V R S F W V P R L I E K M E Q N S S T T T T Y C C P Q N N N N N S L L L P S Q S
gm020185_Glyma0    I Q K Q A R H L K I Y T D S R E F Q E L V R R F W M P R L L Q K A K E S S S S N M S I - - - - - - Q N Q A I P M P - - -
gm013215_Glyma0    I Q K Q A R H L K I D T D S R E F Q E L V R R F W M P R L L Q K A K E S S S S A M S I - - - - - - Q N Q A T P M P - - -
 
AT1G68320.1     H D S L S M Q K D I - - - - - - - - - D Y S G - - - - - - - - - - - - - - F S N I D G S S S T S T C M S - - - - - H L T
gm020185_Glyma0    F D Y V S Q H L T V G T I P - - - - - P W Q G P C M N E A G P T Y M D Q H E Q N S D S E H N N G S C I S L S E S A N I P
gm013215_Glyma0    F D G V S Q H S T V G T I P S H S H T P W Q G P C M N E A G P T Y M D Q H E Q N S D S E H N N G S C I S L S E S A N F P
 
AT1G68320.1     T V P - H F M D Q S N T N I I D G S M C F H E G N V Q E F G G Y V P G M E D Y M V N S D I - S M E C H V A D G Y S A Y E
gm020185_Glyma0    K V P Q H F G H T T I T Q - - - - - - - F H A L N T N D F G T F T - - Y E G Y N V N N N V Y E M D N F K T T T T W V A E
gm013215_Glyma0    K V P Q H F G R T T I T Q - - - - - - - Y H A L N N N D F G T F T - - Y D G Y N V S N N V Y E M D N F K T P T T R V A E
 
AT1G68320.1     D V T Q D P - - - - - - - - - - - - - - - - - - - M W N V D D I W Q F R E - - -
gm020185_Glyma0    D - A Q Y P I G D C Q M V G S N W V N N D F A C N M W N M D E L W Q F S K L Q K
gm013215_Glyma0    D - A Q Y P T G D C Q M V G S N W V N S D F A C N M W N M D E L W Q F S K L Q K
 
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