fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G68360.1 TTFDDGLGLDLHLSLA at 229/244 in AT1G68360.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os000296 VPEDTCLGLDLQLSLA in 253/267 AT1G68360.1 1st_1st 0.333333333 Ib
Gm029021 FDDAWGLDLHLSLAPA in 265/283 AT1G68360.1 1st_1st 0.387096774 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G68360.1     ME--ELDFSSK----TTTSRLKLFGFSVDGE----------EDFSDQSVKTNLSSVSPER
Os000296_Os01t0 MS-------------MTSPRLKLFGFDVSEEETAEHEEQ--------------YSAEPES
gm029021_Glyma1 METTQLDYNTKKTNPTSPTRLKLFGFSVHHEDIMDEDEVAHDDVADSTTKVT-SSTSPSS
                *.              :..*******.*  *                       *..*. 

AT1G68360.1     GEFPAGSSGRSGGGVRS--------RGGGGGGGERKYECQYCCREFGNSQALGGHQNAHK
Os000296_Os01t0 APVCGGNGGGGGGGSDSSSSSTTTTTTATAGGDGRRYECQYCCREFANSQALGGHQNAHK
gm029021_Glyma1 ---PSDSPDSSVAG------------AGPPSSADRKYECQYCCREFANSQALGGHQNAHK
                    ... . . .*             .  ..  *:**********.*************

AT1G68360.1     KERQQLKRAQLQATRNAAANFSNAGSASQFLR-NPIVSAFAPPPHLLS-SSAVPQPMGGP
Os000296_Os01t0 KERQQLKRAQLQAAAAAAGRVA-GGAAALYPRANPMVSAFAPTPHLLG-GGE----AGPT
gm029021_Glyma1 KERQQLKRAQLQASRNAAVS---------FVR-NPMISAFAPPPHLLAPPGTVVVPAAPP
                *************:  **           : * **::*****.****.  .      . .

AT1G68360.1     -WMYL-PRVSP-------SQLH--VSHGCVIQDGSGG------AGAGGFSYE--------
Os000296_Os01t0 SWVYFSPRAAAVAGGAQGQQFH--VSHGCVFPARGAGPAAVAAASPAVFSYTPA------
gm029021_Glyma1 SWVYVPPRAAP-------PPFHVSVSHGCAFPSAHGN------SNNNGFSSSSSNNSNNV
                 *:*. **.:.         :*  *****.:    ..      :.   **          

AT1G68360.1     ---YGARDSG------FGVVG-------------AQMRHVQAHGPRPSVNGFSR-EVGTT
Os000296_Os01t0 ---TSAAAVAAASAPYVTT---------------DEHHGRRIHA--SSAASLAR-YPGPA
gm029021_Glyma1 TITTGVKSAGAGMFPYVGVVGDSSSLALSTVQVQARAHHARIDG--PSLSRFSKGDSGPK
                    ..   .      . .                . :  : ..  .*   :::   *. 

AT1G68360.1     F-----------DDGLGLDLHLSLAPAGH------
Os000296_Os01t0 MVVAEPVATVPEDTCLGLDLQLSLAPAGL------
gm029021_Glyma1 F-----------DDAWGLDLHLSLAPAAPSSLGSA
                :           *   ****:******.
BoxShade v3.31 C (beta, 970507) Output
AT1G68360.1     M E - - E L D F S S K - - - - T T T S R L K L F G F S V D G E - - - - - - - - - - E D F S D Q S V K T N L S S V S P E R
Os000296_Os01t0    M S - - - - - - - - - - - - - M T S P R L K L F G F D V S E E E T A E H E E Q - - - - - - - - - - - - - - Y S A E P E S
gm029021_Glyma1    M E T T Q L D Y N T K K T N P T S P T R L K L F G F S V H H E D I M D E D E V A H D D V A D S T T K V T - S S T S P S S
 
AT1G68360.1     G E F P A G S S G R S G G G V R S - - - - - - - - R G G G G G G G E R K Y E C Q Y C C R E F G N S Q A L G G H Q N A H K
Os000296_Os01t0    A P V C G G N G G G G G G G S D S S S S S T T T T T T A T A G G D G R R Y E C Q Y C C R E F A N S Q A L G G H Q N A H K
gm029021_Glyma1    - - - P S D S P D S S V A G - - - - - - - - - - - - A G P P S S A D R K Y E C Q Y C C R E F A N S Q A L G G H Q N A H K
 
AT1G68360.1     K E R Q Q L K R A Q L Q A T R N A A A N F S N A G S A S Q F L R - N P I V S A F A P P P H L L S - S S A V P Q P M G G P
Os000296_Os01t0    K E R Q Q L K R A Q L Q A A A A A A G R V A - G G A A A L Y P R A N P M V S A F A P T P H L L G - G G E - - - - A G P T
gm029021_Glyma1    K E R Q Q L K R A Q L Q A S R N A A V S - - - - - - - - - F V R - N P M I S A F A P P P H L L A P P G T V V V P A A P P
 
AT1G68360.1     - W M Y L - P R V S P - - - - - - - S Q L H - - V S H G C V I Q D G S G G - - - - - - A G A G G F S Y E - - - - - - - -
Os000296_Os01t0    S W V Y F S P R A A A V A G G A Q G Q Q F H - - V S H G C V F P A R G A G P A A V A A A S P A V F S Y T P A - - - - - -
gm029021_Glyma1    S W V Y V P P R A A P - - - - - - - P P F H V S V S H G C A F P S A H G N - - - - - - S N N N G F S S S S S N N S N N V
 
AT1G68360.1     - - - Y G A R D S G - - - - - - F G V V G - - - - - - - - - - - - - A Q M R H V Q A H G P R P S V N G F S R - E V G T T
Os000296_Os01t0    - - - T S A A A V A A A S A P Y V T T - - - - - - - - - - - - - - - D E H H G R R I H A - - S S A A S L A R - Y P G P A
gm029021_Glyma1    T I T T G V K S A G A G M F P Y V G V V G D S S S L A L S T V Q V Q A R A H H A R I D G - - P S L S R F S K G D S G P K
 
AT1G68360.1     F - - - - - - - - - - - D D G L G L D L H L S L A P A G H - - - - - -
Os000296_Os01t0    M V V A E P V A T V P E D T C L G L D L Q L S L A P A G L - - - - - -
gm029021_Glyma1    F - - - - - - - - - - - D D A W G L D L H L S L A P A A P S S L G S A
 
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