fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G68360.1 TTFDDGLGLDLHLSLA at 229/244 in AT1G68360.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os000296 VPEDTCLGLDLQLSLA in 253/267 AT1G68360.1 1st_1st 0.333333333 Ib
Gm029021 FDDAWGLDLHLSLAPA in 265/283 AT1G68360.1 1st_1st 0.387096774 Ib
Pt033380 PNFDEKLGLDLHLSLA in 233/247 AT1G68360.1 1st_1st 0.435483870 Ia
Pt041041 PSFDDKLSLDLHLSLS in 231/245 AT1G68360.1 not_1st 0.408602150 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G68360.1     --MEELDFSSK----TTTSRLKLFGFSVD------GEEDFS-----DQSVKTNLSSVSPE
Os000296_Os01t0 --MS-----------MTSPRLKLFGFDVSEEETAEHEEQYS----AEPESAPVCGGNGGG
pt033380_POPTR_ --MAELDYETKHNS--TSTRLKLFGFNVSE-----DEEQIT-------TT----DSLKSS
gm029021_Glyma1 METTQLDYNTKKTNPTSPTRLKLFGFSVHHEDI-MDEDEVAHDDVADSTTKVTSSTSPSS
pt041041_POPTR_ --MAELDYETKHNSTTTSTRLKLFGFNVSE-----DEELIA-------TTY--SSSLKSS
                                :..*******.*        *:  :             .     

AT1G68360.1     RGEFPAGSSGRSGGGVRSRGGGGGGGERKYECQYCCREFGNSQALGGHQNAHKKERQQLK
Os000296_Os01t0 GGGGSDSSSSST---TTTTTATAGGDGRRYECQYCCREFANSQALGGHQNAHKKERQQLK
pt033380_POPTR_ SCNSPDDSSFATA--TTTVPATASGDSRKYECQYCCREFANSQALGGHQNAHKKERQQLK
gm029021_Glyma1 PSDSPDSSVAGA--------GPPSSADRKYECQYCCREFANSQALGGHQNAHKKERQQLK
pt041041_POPTR_ SCNTPDSSSFGT--------ATATGDSRKYECQYCSREFANSQALGGHQNAHKKERQQLK
                    . .*   :        .   .  *:******.***.********************

AT1G68360.1     RAQLQATRNAAANFSNAGSASQFLR-NPIVSAFAPPPHLLS--SSAVPQPMGGP-WMYL-
Os000296_Os01t0 RAQLQAAAAAAGRVA-GGAAALYPRANPMVSAFAPTPHLLG--GGE----AGPTSWVYFS
pt033380_POPTR_ RAQMQATRNAAA------AAVSFGR-NPMISAFAPPPHLLAQAAGQVMVPAASPSWVYL-
gm029021_Glyma1 RAQLQASRN---------AAVSFVR-NPMISAFAPPPHLLA-PPGTVVVPAAPPSWVYVP
pt041041_POPTR_ RAQMQATRNAAA------AAVSFGR-NPMISAFAPPPHLLAQAAGQVVVPEASQSWVYL-
                ***:**:           :*  : * **::*****.****.   .      .   *:*. 

AT1G68360.1     PRVSP-------SQLH--VSHGCVIQD-------------------------GSGGAGAG
Os000296_Os01t0 PRAAAVAGGAQGQQFH--VSHGCVFPA-------RGAGPA------------AVAAASPA
pt033380_POPTR_ PRAA--------TPFH--VSHGCVFPS-------------------------GVSGRGGG
gm029021_Glyma1 PRAAP-------PPFHVSVSHGCAFPSAHGNSNNNGFSSSSSNNSNNVTITTGVKSAGAG
pt041041_POPTR_ PRAA--------PPFH--VSHGSVFPR-------------------------GVGGRGVG
                **.:          :*  ****..:                           .  . . .

AT1G68360.1     GFSYEYGARDSG-FGVVGAQMRHVQA-----------HGPRPSVNGFSR-EVGTTF----
Os000296_Os01t0 VFSYTPATSA---AAVAAASAPYVTTDEHHGRRIHASSAA--SLARYP----GPAMVVAE
pt033380_POPTR_ GLPYGDSVGDFGFSTSASGPHQQLQSRAHFSSVVDDHSGP-TSLSRFSEGDDGPNF----
gm029021_Glyma1 MFPYVGVVGD---SSSLALSTVQVQARAHHARI----DGP--SLSRFSKGDSGPKF----
pt041041_POPTR_ SLTYGGSVGDFGLASSASGPYQQVQSRAHISRVIGDLNGP-TSLSRFSKSDGGPSF----
                 :.*   .         .     : :            ..  *:  :.    *. :    

AT1G68360.1     -------DDGLGLDLHLSLAPAGH------
Os000296_Os01t0 PVATVPEDTCLGLDLQLSLAPAGL------
pt033380_POPTR_ -------DEKLGLDLHLSLAPAGP------
gm029021_Glyma1 -------DDAWGLDLHLSLAPAAPSSLGSA
pt041041_POPTR_ -------DDKLSLDLHLSLSPAGP------
                       *   .***:***:**.
BoxShade v3.31 C (beta, 970507) Output
AT1G68360.1     - - M E E L D F S S K - - - - T T T S R L K L F G F S V D - - - - - - G E E D F S - - - - - D Q S V K T N L S S V S P E
Os000296_Os01t0    - - M S - - - - - - - - - - - M T S P R L K L F G F D V S E E E T A E H E E Q Y S - - - - A E P E S A P V C G G N G G G
pt033380_POPTR_    - - M A E L D Y E T K H N S - - T S T R L K L F G F N V S E - - - - - D E E Q I T - - - - - - - T T - - - - D S L K S S
gm029021_Glyma1    M E T T Q L D Y N T K K T N P T S P T R L K L F G F S V H H E D I - M D E D E V A H D D V A D S T T K V T S S T S P S S
pt041041_POPTR_    - - M A E L D Y E T K H N S T T T S T R L K L F G F N V S E - - - - - D E E L I A - - - - - - - T T Y - - S S S L K S S
 
AT1G68360.1     R G E F P A G S S G R S G G G V R S R G G G G G G G E R K Y E C Q Y C C R E F G N S Q A L G G H Q N A H K K E R Q Q L K
Os000296_Os01t0    G G G G S D S S S S S T - - - T T T T T A T A G G D G R R Y E C Q Y C C R E F A N S Q A L G G H Q N A H K K E R Q Q L K
pt033380_POPTR_    S C N S P D D S S F A T A - - T T T V P A T A S G D S R K Y E C Q Y C C R E F A N S Q A L G G H Q N A H K K E R Q Q L K
gm029021_Glyma1    P S D S P D S S V A G A - - - - - - - - G P P S S A D R K Y E C Q Y C C R E F A N S Q A L G G H Q N A H K K E R Q Q L K
pt041041_POPTR_    S C N T P D S S S F G T - - - - - - - - A T A T G D S R K Y E C Q Y C S R E F A N S Q A L G G H Q N A H K K E R Q Q L K
 
AT1G68360.1     R A Q L Q A T R N A A A N F S N A G S A S Q F L R - N P I V S A F A P P P H L L S - - S S A V P Q P M G G P - W M Y L -
Os000296_Os01t0    R A Q L Q A A A A A A G R V A - G G A A A L Y P R A N P M V S A F A P T P H L L G - - G G E - - - - A G P T S W V Y F S
pt033380_POPTR_    R A Q M Q A T R N A A A - - - - - - A A V S F G R - N P M I S A F A P P P H L L A Q A A G Q V M V P A A S P S W V Y L -
gm029021_Glyma1    R A Q L Q A S R N - - - - - - - - - A A V S F V R - N P M I S A F A P P P H L L A - P P G T V V V P A A P P S W V Y V P
pt041041_POPTR_    R A Q M Q A T R N A A A - - - - - - A A V S F G R - N P M I S A F A P P P H L L A Q A A G Q V V V P E A S Q S W V Y L -
 
AT1G68360.1     P R V S P - - - - - - - S Q L H - - V S H G C V I Q D - - - - - - - - - - - - - - - - - - - - - - - - - G S G G A G A G
Os000296_Os01t0    P R A A A V A G G A Q G Q Q F H - - V S H G C V F P A - - - - - - - R G A G P A - - - - - - - - - - - - A V A A A S P A
pt033380_POPTR_    P R A A - - - - - - - - T P F H - - V S H G C V F P S - - - - - - - - - - - - - - - - - - - - - - - - - G V S G R G G G
gm029021_Glyma1    P R A A P - - - - - - - P P F H V S V S H G C A F P S A H G N S N N N G F S S S S S N N S N N V T I T T G V K S A G A G
pt041041_POPTR_    P R A A - - - - - - - - P P F H - - V S H G S V F P R - - - - - - - - - - - - - - - - - - - - - - - - - G V G G R G V G
 
AT1G68360.1     G F S Y E Y G A R D S G - F G V V G A Q M R H V Q A - - - - - - - - - - - H G P R P S V N G F S R - E V G T T F - - - -
Os000296_Os01t0    V F S Y T P A T S A - - - A A V A A A S A P Y V T T D E H H G R R I H A S S A A - - S L A R Y P - - - - G P A M V V A E
pt033380_POPTR_    G L P Y G D S V G D F G F S T S A S G P H Q Q L Q S R A H F S S V V D D H S G P - T S L S R F S E G D D G P N F - - - -
gm029021_Glyma1    M F P Y V G V V G D - - - S S S L A L S T V Q V Q A R A H H A R I - - - - D G P - - S L S R F S K G D S G P K F - - - -
pt041041_POPTR_    S L T Y G G S V G D F G L A S S A S G P Y Q Q V Q S R A H I S R V I G D L N G P - T S L S R F S K S D G G P S F - - - -
 
AT1G68360.1     - - - - - - - D D G L G L D L H L S L A P A G H - - - - - -
Os000296_Os01t0    P V A T V P E D T C L G L D L Q L S L A P A G L - - - - - -
pt033380_POPTR_    - - - - - - - D E K L G L D L H L S L A P A G P - - - - - -
gm029021_Glyma1    - - - - - - - D D A W G L D L H L S L A P A A P S S L G S A
pt041041_POPTR_    - - - - - - - D D K L S L D L H L S L S P A G P - - - - - -
 
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