fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G68360.1 TTFDDGLGLDLHLSLA at 229/244 in AT1G68360.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt041041 PSFDDKLSLDLHLSLS in 231/245 AT1G68360.1 not_1st 0.408602150 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G68360.1     MEELDFSSK----TTTSRLKLFGFSVDGEEDFSDQSVKTNLSSVS---PERGEFPAGSSG
pt041041_POPTR_ MAELDYETKHNSTTTSTRLKLFGFNVSEDEELIATTYSSSLKSSSCNTPDSSSFGTATA-
                * ***:.:*    **::*******.*. :*::   : .:.*.* *   *: ..* :.:: 

AT1G68360.1     RSGGGVRSRGGGGGGGERKYECQYCCREFGNSQALGGHQNAHKKERQQLKRAQLQATRNA
pt041041_POPTR_ -------------TGDSRKYECQYCSREFANSQALGGHQNAHKKERQQLKRAQMQATRNA
                              *..********.***.***********************:******

AT1G68360.1     AANFSNAGSASQFLRNPIVSAFAPPPHLLSSSA----VPQPMGGPWMYLPRVSPSQLHVS
pt041041_POPTR_ AA------AAVSFGRNPMISAFAPPPHLLAQAAGQVVVPEA-SQSWVYLPRAAPP-FHVS
                **      :* .* ***::**********:.:*    **:. . .*:****.:*. :***

AT1G68360.1     HGCVIQDGSGGAGAGGFSYEYGARDSGFGVVGA-----QMRHVQAH---------GPRPS
pt041041_POPTR_ HGSVFPRGVGGRGVG--SLTYGGSVGDFGLASSASGPYQQVQSRAHISRVIGDLNGP-TS
                **.*:  * ** *.*  *  **.  ..**:..:     *  : :**         ** .*

AT1G68360.1     VNGFSR-EVGTTFDDGLGLDLHLSLAPAGH
pt041041_POPTR_ LSRFSKSDGGPSFDDKLSLDLHLSLSPAGP
                :. **: : *.:*** *.*******:***
BoxShade v3.31 C (beta, 970507) Output
AT1G68360.1     M E E L D F S S K - - - - T T T S R L K L F G F S V D G E E D F S D Q S V K T N L S S V S - - - P E R G E F P A G S S G
pt041041_POPTR_    M A E L D Y E T K H N S T T T S T R L K L F G F N V S E D E E L I A T T Y S S S L K S S S C N T P D S S S F G T A T A -
 
AT1G68360.1     R S G G G V R S R G G G G G G G E R K Y E C Q Y C C R E F G N S Q A L G G H Q N A H K K E R Q Q L K R A Q L Q A T R N A
pt041041_POPTR_    - - - - - - - - - - - - - T G D S R K Y E C Q Y C S R E F A N S Q A L G G H Q N A H K K E R Q Q L K R A Q M Q A T R N A
 
AT1G68360.1     A A N F S N A G S A S Q F L R N P I V S A F A P P P H L L S S S A - - - - V P Q P M G G P W M Y L P R V S P S Q L H V S
pt041041_POPTR_    A A - - - - - - A A V S F G R N P M I S A F A P P P H L L A Q A A G Q V V V P E A - S Q S W V Y L P R A A P P - F H V S
 
AT1G68360.1     H G C V I Q D G S G G A G A G G F S Y E Y G A R D S G F G V V G A - - - - - Q M R H V Q A H - - - - - - - - - G P R P S
pt041041_POPTR_    H G S V F P R G V G G R G V G - - S L T Y G G S V G D F G L A S S A S G P Y Q Q V Q S R A H I S R V I G D L N G P - T S
 
AT1G68360.1     V N G F S R - E V G T T F D D G L G L D L H L S L A P A G H
pt041041_POPTR_    L S R F S K S D G G P S F D D K L S L D L H L S L S P A G P
 
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