fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G68360.1 TTFDDGLGLDLHLSLA at 229/244 in AT1G68360.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt033380 PNFDEKLGLDLHLSLA in 233/247 AT1G68360.1 1st_1st 0.435483870 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G68360.1     MEELDFSSK--TTTSRLKLFGFSV--DGEEDFSDQSVKTNLSSVSPERGEF-------PA
pt033380_POPTR_ MAELDYETKHNSTSTRLKLFGFNVSEDEEQITTTDSLKSS-SCNSPDDSSFATATTTVPA
                * ***:.:*  :*::*******.*  * *:  : :*:*:. *. **: ..*       **

AT1G68360.1     GSSGRSGGGVRSRGGGGGGGERKYECQYCCREFGNSQALGGHQNAHKKERQQLKRAQLQA
pt033380_POPTR_ TASGDS---------------RKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQMQA
                 :** *               ************.***********************:**

AT1G68360.1     TRNAAANFSNAGSASQFLRNPIVSAFAPPPHLLSSSA--VPQPMGGP-WMYLPRVSPSQL
pt033380_POPTR_ TRNAAA------AAVSFGRNPMISAFAPPPHLLAQAAGQVMVPAASPSWVYLPRAA-TPF
                ******      :* .* ***::**********:.:*  *  * ..* *:****.: : :

AT1G68360.1     HVSHGCVIQDGSGGAGAGGFSYEYGARDSGFGVVGA---QMRHVQAH---------GPRP
pt033380_POPTR_ HVSHGCVFPSGVSGRGGGGLPYGDSVGDFGFSTSASGPHQQLQSRAHFSSVVDDHSGP-T
                *******: .* .* *.**:.*  .. * **.. .:   *  : :**         ** .

AT1G68360.1     SVNGFSR-EVGTTFDDGLGLDLHLSLAPAGH
pt033380_POPTR_ SLSRFSEGDDGPNFDEKLGLDLHLSLAPAGP
                *:. **. : *..**: *************
BoxShade v3.31 C (beta, 970507) Output
AT1G68360.1     M E E L D F S S K - - T T T S R L K L F G F S V - - D G E E D F S D Q S V K T N L S S V S P E R G E F - - - - - - - P A
pt033380_POPTR_    M A E L D Y E T K H N S T S T R L K L F G F N V S E D E E Q I T T T D S L K S S - S C N S P D D S S F A T A T T T V P A
 
AT1G68360.1     G S S G R S G G G V R S R G G G G G G G E R K Y E C Q Y C C R E F G N S Q A L G G H Q N A H K K E R Q Q L K R A Q L Q A
pt033380_POPTR_    T A S G D S - - - - - - - - - - - - - - - R K Y E C Q Y C C R E F A N S Q A L G G H Q N A H K K E R Q Q L K R A Q M Q A
 
AT1G68360.1     T R N A A A N F S N A G S A S Q F L R N P I V S A F A P P P H L L S S S A - - V P Q P M G G P - W M Y L P R V S P S Q L
pt033380_POPTR_    T R N A A A - - - - - - A A V S F G R N P M I S A F A P P P H L L A Q A A G Q V M V P A A S P S W V Y L P R A A - T P F
 
AT1G68360.1     H V S H G C V I Q D G S G G A G A G G F S Y E Y G A R D S G F G V V G A - - - Q M R H V Q A H - - - - - - - - - G P R P
pt033380_POPTR_    H V S H G C V F P S G V S G R G G G G L P Y G D S V G D F G F S T S A S G P H Q Q L Q S R A H F S S V V D D H S G P - T
 
AT1G68360.1     S V N G F S R - E V G T T F D D G L G L D L H L S L A P A G H
pt033380_POPTR_    S L S R F S E G D D G P N F D E K L G L D L H L S L A P A G P
 
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