fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G68360.1 TTFDDGLGLDLHLSLA at 229/244 in AT1G68360.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt033380 PNFDEKLGLDLHLSLA in 233/247 AT1G68360.1 1st_1st 0.435483870 Ia
Pt041041 PSFDDKLSLDLHLSLS in 231/245 AT1G68360.1 not_1st 0.408602150 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G68360.1     MEELDFSSK----TTTSRLKLFGFSVDGEEDFSDQSVKTNLSSVS---PERGEF------
pt033380_POPTR_ MAELDYETKHNS--TSTRLKLFGFNVSEDEEQITTT--DSLKSSSCNSPDDSSFATATTT
pt041041_POPTR_ MAELDYETKHNSTTTSTRLKLFGFNVSEDEELIATTYSSSLKSSSCNTPDSSSFGT----
                * ***:.:*     *::*******.*. :*:    :   .*.* *   *: ..*      

AT1G68360.1     -PAGSSGRSGGGVRSRGGGGGGGERKYECQYCCREFGNSQALGGHQNAHKKERQQLKRAQ
pt033380_POPTR_ VPATASGDS---------------RKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQ
pt041041_POPTR_ --ATATGDS---------------RKYECQYCSREFANSQALGGHQNAHKKERQQLKRAQ
                  * ::* *               ********.***.***********************

AT1G68360.1     LQATRNAAANFSNAGSASQFLRNPIVSAFAPPPHLLSSSA--VPQPMGGP-WMYLPRVSP
pt033380_POPTR_ MQATRNAAA------AAVSFGRNPMISAFAPPPHLLAQAAGQVMVPAASPSWVYLPRAAT
pt041041_POPTR_ MQATRNAAA------AAVSFGRNPMISAFAPPPHLLAQAAGQVVVPEASQSWVYLPRAAP
                :********      :* .* ***::**********:.:*  *  * ..  *:****.:.

AT1G68360.1     SQLHVSHGCVIQDGSGGAGAGGFSYEYGARDSGFGVVGA---QMRHVQAH---------G
pt033380_POPTR_ P-FHVSHGCVFPSGVSGRGGGGLPYGDSVGDFGFSTSASGPHQQLQSRAHFSSVVDDHSG
pt041041_POPTR_ P-FHVSHGSVFPRGVGGRGVGSLTYGGSVGDFGLASSASGPYQQVQSRAHISRVIGDLNG
                . :*****.*:  * .* * *.:.*  .. * *:.  .:   *  : :**         *

AT1G68360.1     PRPSVNGFSR-EVGTTFDDGLGLDLHLSLAPAGH
pt033380_POPTR_ P-TSLSRFSEGDDGPNFDEKLGLDLHLSLAPAGP
pt041041_POPTR_ P-TSLSRFSKSDGGPSFDDKLSLDLHLSLSPAGP
                * .*:. **. : *..**: *.*******:***
BoxShade v3.31 C (beta, 970507) Output
AT1G68360.1     M E E L D F S S K - - - - T T T S R L K L F G F S V D G E E D F S D Q S V K T N L S S V S - - - P E R G E F - - - - - -
pt033380_POPTR_    M A E L D Y E T K H N S - - T S T R L K L F G F N V S E D E E Q I T T T - - D S L K S S S C N S P D D S S F A T A T T T
pt041041_POPTR_    M A E L D Y E T K H N S T T T S T R L K L F G F N V S E D E E L I A T T Y S S S L K S S S C N T P D S S S F G T - - - -
 
AT1G68360.1     - P A G S S G R S G G G V R S R G G G G G G G E R K Y E C Q Y C C R E F G N S Q A L G G H Q N A H K K E R Q Q L K R A Q
pt033380_POPTR_    V P A T A S G D S - - - - - - - - - - - - - - - R K Y E C Q Y C C R E F A N S Q A L G G H Q N A H K K E R Q Q L K R A Q
pt041041_POPTR_    - - A T A T G D S - - - - - - - - - - - - - - - R K Y E C Q Y C S R E F A N S Q A L G G H Q N A H K K E R Q Q L K R A Q
 
AT1G68360.1     L Q A T R N A A A N F S N A G S A S Q F L R N P I V S A F A P P P H L L S S S A - - V P Q P M G G P - W M Y L P R V S P
pt033380_POPTR_    M Q A T R N A A A - - - - - - A A V S F G R N P M I S A F A P P P H L L A Q A A G Q V M V P A A S P S W V Y L P R A A T
pt041041_POPTR_    M Q A T R N A A A - - - - - - A A V S F G R N P M I S A F A P P P H L L A Q A A G Q V V V P E A S Q S W V Y L P R A A P
 
AT1G68360.1     S Q L H V S H G C V I Q D G S G G A G A G G F S Y E Y G A R D S G F G V V G A - - - Q M R H V Q A H - - - - - - - - - G
pt033380_POPTR_    P - F H V S H G C V F P S G V S G R G G G G L P Y G D S V G D F G F S T S A S G P H Q Q L Q S R A H F S S V V D D H S G
pt041041_POPTR_    P - F H V S H G S V F P R G V G G R G V G S L T Y G G S V G D F G L A S S A S G P Y Q Q V Q S R A H I S R V I G D L N G
 
AT1G68360.1     P R P S V N G F S R - E V G T T F D D G L G L D L H L S L A P A G H
pt033380_POPTR_    P - T S L S R F S E G D D G P N F D E K L G L D L H L S L A P A G P
pt041041_POPTR_    P - T S L S R F S K S D G G P S F D D K L S L D L H L S L S P A G P
 
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