fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G68360.1 TTFDDGLGLDLHLSLA at 229/244 in AT1G68360.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os000296 VPEDTCLGLDLQLSLA in 253/267 AT1G68360.1 1st_1st 0.333333333 Ib
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G68360.1     MEELDFSSKTTTSRLKLFGFSVDGEE--DFSDQSVKTNLSSVSPERGEFPAGSSGRSGGG
Os000296_Os01t0 -------MSMTSPRLKLFGFDVSEEETAEHEEQ------YSAEPESAPVCGGNGGGGGGG
                        . *:.*******.*. **  :..:*       *..** . . .*..* .***

AT1G68360.1     VRSRGGG--------GGGGERKYECQYCCREFGNSQALGGHQNAHKKERQQLKRAQLQAT
Os000296_Os01t0 SDSSSSSTTTTTTATAGGDGRRYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQAA
                  * ...        .**. *:**********.**************************:

AT1G68360.1     RNAAANFSNAGSASQFLR-NPIVSAFAPPPHLLSSSAVPQPMGGP--WMYL-PRVSP---
Os000296_Os01t0 AAAAGRVA-GGAAALYPRANPMVSAFAPTPHLLGGGE-----AGPTSWVYFSPRAAAVAG
                  **...: .*:*: : * **:******.****...      .**  *:*: **.:.   

AT1G68360.1     ----SQLHVSHGCVI-QDGSGGAGAGGFS---YEYGARDSGFGVVGAQMRHV---QAHGP
Os000296_Os01t0 GAQGQQFHVSHGCVFPARGAGPAAVAAASPAVFSYTPATSAAAVAAASAPYVTTDEHHGR
                    .*:*******:   *:* *.... *   :.* .  *. .*..*.  :*   : ** 

AT1G68360.1     R---PSVNGFSREVGTTF-----------DDGLGLDLHLSLAPAGH
Os000296_Os01t0 RIHASSAASLARYPGPAMVVAEPVATVPEDTCLGLDLQLSLAPAGL
                *   .*. .::*  *.::           *  *****:*******
BoxShade v3.31 C (beta, 970507) Output
AT1G68360.1     M E E L D F S S K T T T S R L K L F G F S V D G E E - - D F S D Q S V K T N L S S V S P E R G E F P A G S S G R S G G G
Os000296_Os01t0    - - - - - - - M S M T S P R L K L F G F D V S E E E T A E H E E Q - - - - - - Y S A E P E S A P V C G G N G G G G G G G
 
AT1G68360.1     V R S R G G G - - - - - - - - G G G G E R K Y E C Q Y C C R E F G N S Q A L G G H Q N A H K K E R Q Q L K R A Q L Q A T
Os000296_Os01t0    S D S S S S S T T T T T T A T A G G D G R R Y E C Q Y C C R E F A N S Q A L G G H Q N A H K K E R Q Q L K R A Q L Q A A
 
AT1G68360.1     R N A A A N F S N A G S A S Q F L R - N P I V S A F A P P P H L L S S S A V P Q P M G G P - - W M Y L - P R V S P - - -
Os000296_Os01t0    A A A A G R V A - G G A A A L Y P R A N P M V S A F A P T P H L L G G G E - - - - - A G P T S W V Y F S P R A A A V A G
 
AT1G68360.1     - - - - S Q L H V S H G C V I - Q D G S G G A G A G G F S - - - Y E Y G A R D S G F G V V G A Q M R H V - - - Q A H G P
Os000296_Os01t0    G A Q G Q Q F H V S H G C V F P A R G A G P A A V A A A S P A V F S Y T P A T S A A A V A A A S A P Y V T T D E H H G R
 
AT1G68360.1     R - - - P S V N G F S R E V G T T F - - - - - - - - - - - D D G L G L D L H L S L A P A G H
Os000296_Os01t0    R I H A S S A A S L A R Y P G P A M V V A E P V A T V P E D T C L G L D L Q L S L A P A G L
 
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