fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G68360.1 TTFDDGLGLDLHLSLA at 229/244 in AT1G68360.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm029021 FDDAWGLDLHLSLAPA in 265/283 AT1G68360.1 1st_1st 0.387096774 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G68360.1     ME--ELDFSSK----TTTSRLKLFGFSVDGE----------EDFSDQSVKTNLSSVSPER
gm029021_Glyma1 METTQLDYNTKKTNPTSPTRLKLFGFSVHHEDIMDEDEVAHDDVADSTTKVT-SSTSPSS
                **  :**:.:*    *:.:*********. *          :*.:*.:.*.. **.**. 

AT1G68360.1     GEFPAGSSGRSGGGVRSRGGGGGGGERKYECQYCCREFGNSQALGGHQNAHKKERQQLKR
gm029021_Glyma1 ---PSDSPDSSVAG----AGPPSSADRKYECQYCCREFANSQALGGHQNAHKKERQQLKR
                   *:.*.. * .*    .*  ...:************.*********************

AT1G68360.1     AQLQATRNAAANFSNAGSASQFLRNPIVSAFAPPPHLLS-SSAVPQPMGGP-WMYL-PRV
gm029021_Glyma1 AQLQASRNAAVS---------FVRNPMISAFAPPPHLLAPPGTVVVPAAPPSWVYVPPRA
                *****:****..         *:***::**********: ..:*  * . * *:*: **.

AT1G68360.1     SPSQLH--VSHGCVIQDGSGGAGAGGFSYE-----------YGARDSG------FGVVG-
gm029021_Glyma1 APPPFHVSVSHGCAFPSAHGNSNNNGFSSSSSNNSNNVTITTGVKSAGAGMFPYVGVVGD
                :*. :*  *****.: .. *.:. .*** .            *.:.:*      .**** 

AT1G68360.1     ------------AQMRHVQAHGPRPSVNGFSR-EVGTTFDDGLGLDLHLSLAPAGH----
gm029021_Glyma1 SSSLALSTVQVQARAHHARIDG--PSLSRFSKGDSGPKFDDAWGLDLHLSLAPAAPSSLG
                            *: :*.: .*  **:. **: : *..***. ***********.     

AT1G68360.1     --
gm029021_Glyma1 SA
BoxShade v3.31 C (beta, 970507) Output
AT1G68360.1     M E - - E L D F S S K - - - - T T T S R L K L F G F S V D G E - - - - - - - - - - E D F S D Q S V K T N L S S V S P E R
gm029021_Glyma1    M E T T Q L D Y N T K K T N P T S P T R L K L F G F S V H H E D I M D E D E V A H D D V A D S T T K V T - S S T S P S S
 
AT1G68360.1     G E F P A G S S G R S G G G V R S R G G G G G G G E R K Y E C Q Y C C R E F G N S Q A L G G H Q N A H K K E R Q Q L K R
gm029021_Glyma1    - - - P S D S P D S S V A G - - - - A G P P S S A D R K Y E C Q Y C C R E F A N S Q A L G G H Q N A H K K E R Q Q L K R
 
AT1G68360.1     A Q L Q A T R N A A A N F S N A G S A S Q F L R N P I V S A F A P P P H L L S - S S A V P Q P M G G P - W M Y L - P R V
gm029021_Glyma1    A Q L Q A S R N A A V S - - - - - - - - - F V R N P M I S A F A P P P H L L A P P G T V V V P A A P P S W V Y V P P R A
 
AT1G68360.1     S P S Q L H - - V S H G C V I Q D G S G G A G A G G F S Y E - - - - - - - - - - - Y G A R D S G - - - - - - F G V V G -
gm029021_Glyma1    A P P P F H V S V S H G C A F P S A H G N S N N N G F S S S S S N N S N N V T I T T G V K S A G A G M F P Y V G V V G D
 
AT1G68360.1     - - - - - - - - - - - - A Q M R H V Q A H G P R P S V N G F S R - E V G T T F D D G L G L D L H L S L A P A G H - - - -
gm029021_Glyma1    S S S L A L S T V Q V Q A R A H H A R I D G - - P S L S R F S K G D S G P K F D D A W G L D L H L S L A P A A P S S L G
 
AT1G68360.1     - -
gm029021_Glyma1    S A
 
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