fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G68480.1 HEENYLDLNNLPDDFSK at 7/253 in AT1G68480.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt034323 HENNPLDLNNLPEDYSR in 24/285 AT1G68480.1 1st_1st 0.341920374 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G68480.1     ----------------MRHEENYLDLNNLPDDFSKDGNKQALEEGSSSGQRKKK-GSKEG
pt034323_POPTR_ MGSIYVPLSYYFQDEHRRHENNPLDLNNLPEDYSRDG-KQVLDEGSSSGYRKKKSGAKNG
                                 ***:* *******:*:*:** **.*:****** **** *:*:*

AT1G68480.1     KDESGKVYECRFCSLKFCKSQALGGHMNRHRQ-ERETETLNQARQLVYRNDTITPPGISP
pt034323_POPTR_ KEEGDKVYECRFCSLKFCKSQALGGHMNRHRQGKRETETLNRARQLVFNSDTLAAPGGHP
                *:*..*************************** :*******:*****:..**::.**  *

AT1G68480.1     FGYH-----------HTTDPTIYRSVYSSPMIYPGSSSTNLVPQPP--------MPPPPP
pt034323_POPTR_ -GCHPMGTGSYIPAGNIGDP--FRSVY-PPRLFPGSSST-LLPAPPNQHPHQSYLYTPPS
                 * *           :  **  :**** .* ::****** *:* **        : .**.

AT1G68480.1     PYPYSSNQYSPHNHFNDYYLNPSFRGSRSISPSPNLPTTTTVDY-MADSPVEPGYTCVGA
pt034323_POPTR_ RLPAYKSQY-PQQPINDYYIGHVLNNT-----SQTYPSHQNMNYNMGGS--ESNYTCIGA
                  *  ..** *:: :****:.  :..:     * . *:  .::* *..*  *..***:**

AT1G68480.1     PIGPTGFPIRGPSIVRAPLEPPQGRDGDASRQR-----------------LDHSLRFPIN
pt034323_POPTR_ PVGHGGF---GPGSSRS--TEGSGRDGSLSNQEEGLNWGRNHAAGGQQQCLDHP--SSIN
                *:*  **   **.  *:     .****. *.*.                 ***.   .**

AT1G68480.1     RFQDHHSL
pt034323_POPTR_ RFQDGF--
                **** .
BoxShade v3.31 C (beta, 970507) Output
AT1G68480.1     - - - - - - - - - - - - - - - - M R H E E N Y L D L N N L P D D F S K D G N K Q A L E E G S S S G Q R K K K - G S K E G
pt034323_POPTR_    M G S I Y V P L S Y Y F Q D E H R R H E N N P L D L N N L P E D Y S R D G - K Q V L D E G S S S G Y R K K K S G A K N G
 
AT1G68480.1     K D E S G K V Y E C R F C S L K F C K S Q A L G G H M N R H R Q - E R E T E T L N Q A R Q L V Y R N D T I T P P G I S P
pt034323_POPTR_    K E E G D K V Y E C R F C S L K F C K S Q A L G G H M N R H R Q G K R E T E T L N R A R Q L V F N S D T L A A P G G H P
 
AT1G68480.1     F G Y H - - - - - - - - - - - H T T D P T I Y R S V Y S S P M I Y P G S S S T N L V P Q P P - - - - - - - - M P P P P P
pt034323_POPTR_    - G C H P M G T G S Y I P A G N I G D P - - F R S V Y - P P R L F P G S S S T - L L P A P P N Q H P H Q S Y L Y T P P S
 
AT1G68480.1     P Y P Y S S N Q Y S P H N H F N D Y Y L N P S F R G S R S I S P S P N L P T T T T V D Y - M A D S P V E P G Y T C V G A
pt034323_POPTR_    R L P A Y K S Q Y - P Q Q P I N D Y Y I G H V L N N T - - - - - S Q T Y P S H Q N M N Y N M G G S - - E S N Y T C I G A
 
AT1G68480.1     P I G P T G F P I R G P S I V R A P L E P P Q G R D G D A S R Q R - - - - - - - - - - - - - - - - - L D H S L R F P I N
pt034323_POPTR_    P V G H G G F - - - G P G S S R S - - T E G S G R D G S L S N Q E E G L N W G R N H A A G G Q Q Q C L D H P - - S S I N
 
AT1G68480.1     R F Q D H H S L
pt034323_POPTR_    R F Q D G F - -
 
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