fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G68480.1 HEENYLDLNNLPDDFSK at 7/253 in AT1G68480.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os000268 QEGSPLDLNNLPDEFGK in 12/263 AT1G68480.1 1st_1st 0.248243559 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G68480.1     ----MRHEENYLDLNNLPDDFSKDGNKQALEEGSSSGQRK---KKGSKEGKDESGKVYEC
Os000268_Os01t0 MNSSRRQEGSPLDLNNLPDEFGKQTVESSTTTAASSAEASRVTKKKSNGGKDEAGKVYEC
                     *:* . ********:*.*:  :.:   .:**.: .   ** *: ****:******

AT1G68480.1     RFCSLKFCKSQALGGHMNRHRQERETETLNQARQLVYRNDTIT-----------------
Os000268_Os01t0 RFCSLKFCKSQALGGHMNRHRQERETETLNRARQLVFGNDSLAAVGAQLNFRDVNMGGGG
                ******************************:*****: **:::                 

AT1G68480.1     ----PPGISPFGYHHT-----TDPTIYRSVYSSPM--IYPGSSSTNLVPQPPMPPP----
Os000268_Os01t0 AAAPPPTMQMGGGGFRGGGVGGDPCI-------PLRPVQPRLS-------PPQPPPYHHY
                    ** :.  *  .       ** *       *:  : *  *       ** ***    

AT1G68480.1     ------PP----PYPYSSNQYSPHNH-----FNDYYLNPSFR-GSRSISPSPNLPTTTTV
Os000268_Os01t0 LYTTTAPPSALHPMSYPATYPAPPRHQQPAAVGDYVIGHAVSAGDALVAPPP--------
                      **    * .*.:.  :* .*     ..** :. :.  *.  ::*.*        

AT1G68480.1     DYMADSPVEPGYTCVGAPIGPTGFPIRGPSIVRAPLEPPQGRDGDASRQ-RLDHSLRFPI
Os000268_Os01t0 -----PPHRASFSCFGAPLA-------------APPANVQPDNGNCNCSFGCGHS-----
                     .* ...::*.***:.             **    *  :*:.. .   .**     

AT1G68480.1     NRFQDHHSL
Os000268_Os01t0 NRNVNAAS-
                **  :  *
BoxShade v3.31 C (beta, 970507) Output
AT1G68480.1     - - - - M R H E E N Y L D L N N L P D D F S K D G N K Q A L E E G S S S G Q R K - - - K K G S K E G K D E S G K V Y E C
Os000268_Os01t0    M N S S R R Q E G S P L D L N N L P D E F G K Q T V E S S T T T A A S S A E A S R V T K K K S N G G K D E A G K V Y E C
 
AT1G68480.1     R F C S L K F C K S Q A L G G H M N R H R Q E R E T E T L N Q A R Q L V Y R N D T I T - - - - - - - - - - - - - - - - -
Os000268_Os01t0    R F C S L K F C K S Q A L G G H M N R H R Q E R E T E T L N R A R Q L V F G N D S L A A V G A Q L N F R D V N M G G G G
 
AT1G68480.1     - - - - P P G I S P F G Y H H T - - - - - T D P T I Y R S V Y S S P M - - I Y P G S S S T N L V P Q P P M P P P - - - -
Os000268_Os01t0    A A A P P P T M Q M G G G G F R G G G V G G D P C I - - - - - - - P L R P V Q P R L S - - - - - - - P P Q P P P Y H H Y
 
AT1G68480.1     - - - - - - P P - - - - P Y P Y S S N Q Y S P H N H - - - - - F N D Y Y L N P S F R - G S R S I S P S P N L P T T T T V
Os000268_Os01t0    L Y T T T A P P S A L H P M S Y P A T Y P A P P R H Q Q P A A V G D Y V I G H A V S A G D A L V A P P P - - - - - - - -
 
AT1G68480.1     D Y M A D S P V E P G Y T C V G A P I G P T G F P I R G P S I V R A P L E P P Q G R D G D A S R Q - R L D H S L R F P I
Os000268_Os01t0    - - - - - P P H R A S F S C F G A P L A - - - - - - - - - - - - - A P P A N V Q P D N G N C N C S F G C G H S - - - - -
 
AT1G68480.1     N R F Q D H H S L
Os000268_Os01t0    N R N V N A A S -
 
0