fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G68480.1 HEENYLDLNNLPDDFSK at 7/253 in AT1G68480.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb007440 not found in 223aa AT1G68480.1 1st_1st 0.201405152 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G68480.1     MRHEENYLDLNNLPDDFSKDGNKQALEEGSSSGQRKKKGSKEGKDESGKVYECRFCSLKF
Sb007440_Sorbi1 -----------------------------------MKKKSRGGKDDAAKEYECRFCSLKF
                                                    ** *: ***::.* **********

AT1G68480.1     CKSQALGGHMNRHRQERETETLNQARQLVYRNDTITPPG----ISPFGYHHTTDPTIYRS
Sb007440_Sorbi1 RKSQALGGHMNRHRQERETETLNRARQLVFGNESLATIGAQMSFRDVNMASAASPTVLGG
                 **********************:*****: *::::. *    :  ..   ::.**:  .

AT1G68480.1     VYSSPMIYPGSSSTN-------LVPQPP-----MPPP--------PPPYPYSSNQYSPHN
Sb007440_Sorbi1 NFRGGASATGGSSVGEPCLPFRLSPQPSYHYLYTEPPSTLHPMSYPATYPGPPRQPA---
                 : .    .*.**..       * ***.       **        *..** ...* :   

AT1G68480.1     HFNDYYLNPSFRGSRSISPSPNLPTTTTVDYMADSPVEPGYTCVGAPI-GPTGFPIRGPS
Sb007440_Sorbi1 -VGDYVIGHAVSAAAAAG-----------DALMQSTHRGSFSCFGAPLTAPPAAAAMAAA
                 ..** :. :. .: : .           * : :*. . .::*.***: .*.. .  ..:

AT1G68480.1     IVRAPLEPPQ-------GRDGDASRQRLDHSLRFPINRFQDHHSL
Sb007440_Sorbi1 VATTNVQADKVNCNCSFGCGGHSRNNNVNASST------------
                :. : ::. :       * .*.: .:.:: *
BoxShade v3.31 C (beta, 970507) Output
AT1G68480.1     M R H E E N Y L D L N N L P D D F S K D G N K Q A L E E G S S S G Q R K K K G S K E G K D E S G K V Y E C R F C S L K F
Sb007440_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M K K K S R G G K D D A A K E Y E C R F C S L K F
 
AT1G68480.1     C K S Q A L G G H M N R H R Q E R E T E T L N Q A R Q L V Y R N D T I T P P G - - - - I S P F G Y H H T T D P T I Y R S
Sb007440_Sorbi1    R K S Q A L G G H M N R H R Q E R E T E T L N R A R Q L V F G N E S L A T I G A Q M S F R D V N M A S A A S P T V L G G
 
AT1G68480.1     V Y S S P M I Y P G S S S T N - - - - - - - L V P Q P P - - - - - M P P P - - - - - - - - P P P Y P Y S S N Q Y S P H N
Sb007440_Sorbi1    N F R G G A S A T G G S S V G E P C L P F R L S P Q P S Y H Y L Y T E P P S T L H P M S Y P A T Y P G P P R Q P A - - -
 
AT1G68480.1     H F N D Y Y L N P S F R G S R S I S P S P N L P T T T T V D Y M A D S P V E P G Y T C V G A P I - G P T G F P I R G P S
Sb007440_Sorbi1    - V G D Y V I G H A V S A A A A A G - - - - - - - - - - - D A L M Q S T H R G S F S C F G A P L T A P P A A A A M A A A
 
AT1G68480.1     I V R A P L E P P Q - - - - - - - G R D G D A S R Q R L D H S L R F P I N R F Q D H H S L
Sb007440_Sorbi1    V A T T N V Q A D K V N C N C S F G C G G H S R N N N V N A S S T - - - - - - - - - - - -
 
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