fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G68510.1 DINEVGLELRLG at 226/233 in AT1G68510.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os000273 EVHDAGLDLTLGLPPP in 256/307 AT1G67100.1 1st_not 0.426804123 II
Sb007439 RAAEDGLDLTLGLPLA in 261/297 AT1G67100.1 1st_not 0.439175257 II
Gm035214 SGNEIGLELTLGFEPV in 239/288 AT3G02550.1 1st_not 0.459793814 II
Pt034504 QSDDSDLSLELTLALV in 229/241 AT1G68510.1 not_1st 0.449484536 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G68510.1     MRISCNGCRVLRKGCNQDCTIRPCLQWIKSADSQANATLFLAKFYGRAGLLNLIESGPDH
Sb007439_Sorbi1 MRMSCNGCRVLRKGCSDNCAIRPCLQWIRSPDAQGNATVFLAKFYGRAGLINLITAGPEH
pt034504_POPTR_ --MSCNGCRVLRKGCNDNCTIRPCLQWIKSTDSQANATLFLAKFYGRAGLINLIEAAPQR
gm035214_Glyma1 MRMSCNGCRVLRKGCSEDCSIRPCLQWIKNPESQANATVFLAKFYGRAGLMNLINAGPEN
Os000273_Os01t0 MRMSCNGCRVLRKGCSDNCAIRPCLQWIRSPDAQANATVFLAKFYGRAGLINLITAGPEH
                  :************.::*:********:..::*.***:***********:*** :.*:.

AT1G68510.1     LRPAIFRSLLYEACGRIVNPVDGSVGLMWSGNWAQCQAAVDAVLNGLPITHTPLPSASAS
Sb007439_Sorbi1 VRPAIFRSLLYEACGRMLNPVYGSVGLLWSGNWQLCQAAVESVLRGMPIAQPPPLAATA-
pt034504_POPTR_ LRPAIFSSLLYEACGRIVNPVYGSVGMLWSGNWAQCQAAVDAVLKGLPIISIPSSDVPTP
gm035214_Glyma1 LRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGEPI--TPITSEAAA
Os000273_Os01t0 VRPAIFRSLLYEACGRMLNPVYGSVGLLWSGNWQLCQSAVESVLRGMPIAQPPP-SATA-
                :***** *********::**: ****::***.*  **:**::**.* **   *    .: 

AT1G68510.1     HQIIPPHRTYDIRHVAKDPTTGGDSSENLATRVNA----------NKSKTQ---------
Sb007439_Sorbi1 ---VPPLRSCDIRHVSRREAAGRGAG---AGAVDAAGPGGLHRMANSSRGQFKRSG----
pt034504_POPTR_ H-LISSLNTYDIRHVSRDQNS---------PELNK----------VKSRTRCKRSIGT--
gm035214_Glyma1 NGRAPPLKAYDIRHVSKDQNS--------ANETPK----------TKTRSRFKRTSGTLI
Os000273_Os01t0 ---VPPLPTCDIRHVGARRGDVHGAA---AGPV-----ADLHRLDISSRAKFKRPGGG--
                    ..  : *****.                              .:: :         

AT1G68510.1     --------TGRFKRES-------VNQLG-ECSHDM----WQLPSSSATH--GYGH-----
Sb007439_Sorbi1 -----AHRSGDSGIELVFSQPPSASSMLVD-IRQAQPLNWA--PRQPSHEYSASHDDDGG
pt034504_POPTR_ RPSSLAEPTGRLNQ----------GELGFEPVRES----W------------LGHLGNGD
gm035214_Glyma1 KPKA-SKGTGFVPVE---------PEMA---------------NRTASHESGLSHLSEAT
Os000273_Os01t0 --AAAAHRSDHAAFELVFSKP--AAAMAVDVIRQAQPLNWA--PGALSHE-SASHD---A
                        :.                :                          .*     

AT1G68510.1     ---------FTLENVESRREAPFNQSSPN--LGFDDQVDI--NEVGLELRLG--------
Sb007439_Sorbi1 AVRESD----SNASVDTVDVSHVSQSEPAEPPRESHDERA--AEDGLDLTLGL----PLA
pt034504_POPTR_ SRIKDEDSILAAENVE---DSLWSRVEPDQVFKFNGQSDD--SDLSLELTLAL------V
gm035214_Glyma1 AMVEGES--KESESVVSMDTSNLIHEEPEWVAKTSDGTGESGNEIGLELTLGF----EPV
Os000273_Os01t0 APPESEG--HSNDTADTVDGSHVSQSEP-EPRATSAATEV--HDAGLDLTLGLPPPPPPV
                             ..     :   : .*      .        : .*:* *.        

AT1G68510.1     --------------------------------------------
Sb007439_Sorbi1 HK---VEPSDVD---DDQPCHRGGE----PM--------KNWAW
pt034504_POPTR_ SE------------------------------------------
gm035214_Glyma1 SRLHHVVPMKKRKIIELKSCGDSAEKDSCKMELGL----EYPA-
Os000273_Os01t0 QK---TEPADSDGGSQQQHDHRKEK----PVELGLAISTKVAAQ
BoxShade v3.31 C (beta, 970507) Output
AT1G68510.1     M R I S C N G C R V L R K G C N Q D C T I R P C L Q W I K S A D S Q A N A T L F L A K F Y G R A G L L N L I E S G P D H
Sb007439_Sorbi1    M R M S C N G C R V L R K G C S D N C A I R P C L Q W I R S P D A Q G N A T V F L A K F Y G R A G L I N L I T A G P E H
pt034504_POPTR_    - - M S C N G C R V L R K G C N D N C T I R P C L Q W I K S T D S Q A N A T L F L A K F Y G R A G L I N L I E A A P Q R
gm035214_Glyma1    M R M S C N G C R V L R K G C S E D C S I R P C L Q W I K N P E S Q A N A T V F L A K F Y G R A G L M N L I N A G P E N
Os000273_Os01t0    M R M S C N G C R V L R K G C S D N C A I R P C L Q W I R S P D A Q A N A T V F L A K F Y G R A G L I N L I T A G P E H
 
AT1G68510.1     L R P A I F R S L L Y E A C G R I V N P V D G S V G L M W S G N W A Q C Q A A V D A V L N G L P I T H T P L P S A S A S
Sb007439_Sorbi1    V R P A I F R S L L Y E A C G R M L N P V Y G S V G L L W S G N W Q L C Q A A V E S V L R G M P I A Q P P P L A A T A -
pt034504_POPTR_    L R P A I F S S L L Y E A C G R I V N P V Y G S V G M L W S G N W A Q C Q A A V D A V L K G L P I I S I P S S D V P T P
gm035214_Glyma1    L R P A I F R S L L Y E A C G R I V N P I Y G S V G L L W S G S W Q L C Q A A V E A V L K G E P I - - T P I T S E A A A
Os000273_Os01t0    V R P A I F R S L L Y E A C G R M L N P V Y G S V G L L W S G N W Q L C Q S A V E S V L R G M P I A Q P P P - S A T A -
 
AT1G68510.1     H Q I I P P H R T Y D I R H V A K D P T T G G D S S E N L A T R V N A - - - - - - - - - - N K S K T Q - - - - - - - - -
Sb007439_Sorbi1    - - - V P P L R S C D I R H V S R R E A A G R G A G - - - A G A V D A A G P G G L H R M A N S S R G Q F K R S G - - - -
pt034504_POPTR_    H - L I S S L N T Y D I R H V S R D Q N S - - - - - - - - - P E L N K - - - - - - - - - - V K S R T R C K R S I G T - -
gm035214_Glyma1    N G R A P P L K A Y D I R H V S K D Q N S - - - - - - - - A N E T P K - - - - - - - - - - T K T R S R F K R T S G T L I
Os000273_Os01t0    - - - V P P L P T C D I R H V G A R R G D V H G A A - - - A G P V - - - - - A D L H R L D I S S R A K F K R P G G G - -
 
AT1G68510.1     - - - - - - - - T G R F K R E S - - - - - - - V N Q L G - E C S H D M - - - - W Q L P S S S A T H - - G Y G H - - - - -
Sb007439_Sorbi1    - - - - - A H R S G D S G I E L V F S Q P P S A S S M L V D - I R Q A Q P L N W A - - P R Q P S H E Y S A S H D D D G G
pt034504_POPTR_    R P S S L A E P T G R L N Q - - - - - - - - - - G E L G F E P V R E S - - - - W - - - - - - - - - - - - L G H L G N G D
gm035214_Glyma1    K P K A - S K G T G F V P V E - - - - - - - - - P E M A - - - - - - - - - - - - - - - N R T A S H E S G L S H L S E A T
Os000273_Os01t0    - - A A A A H R S D H A A F E L V F S K P - - A A A M A V D V I R Q A Q P L N W A - - P G A L S H E - S A S H D - - - A
 
AT1G68510.1     - - - - - - - - - F T L E N V E S R R E A P F N Q S S P N - - L G F D D Q V D I - - N E V G L E L R L G - - - - - - - -
Sb007439_Sorbi1    A V R E S D - - - - S N A S V D T V D V S H V S Q S E P A E P P R E S H D E R A - - A E D G L D L T L G L - - - - P L A
pt034504_POPTR_    S R I K D E D S I L A A E N V E - - - D S L W S R V E P D Q V F K F N G Q S D D - - S D L S L E L T L A L - - - - - - V
gm035214_Glyma1    A M V E G E S - - K E S E S V V S M D T S N L I H E E P E W V A K T S D G T G E S G N E I G L E L T L G F - - - - E P V
Os000273_Os01t0    A P P E S E G - - H S N D T A D T V D G S H V S Q S E P - E P R A T S A A T E V - - H D A G L D L T L G L P P P P P P V
 
AT1G68510.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb007439_Sorbi1    H K - - - V E P S D V D - - - D D Q P C H R G G E - - - - P M - - - - - - - - K N W A W
pt034504_POPTR_    S E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm035214_Glyma1    S R L H H V V P M K K R K I I E L K S C G D S A E K D S C K M E L G L - - - - E Y P A -
Os000273_Os01t0    Q K - - - T E P A D S D G G S Q Q Q H D H R K E K - - - - P V E L G L A I S T K V A A Q
 
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