fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G68510.1 DINEVGLELRLG at 226/233 in AT1G68510.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt042067 DGSDVRLDLTLGLVSE in 234/244 AT1G68510.1 1st_1st 0.461855670 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G68510.1     MRISCNGCRVLRKGCNQDCTIRPCLQWIKSADSQANATLFLAKFYGRAGLLNLIESGPDH
pt042067_POPTR_ MRMSCNGCRVLRKGCSDNCTIRPCLQWIKTPDSQANATLFLAKFYGRAGLVNLIEAGPPK
                **:************.::***********:.*******************:****:** :

AT1G68510.1     LRPAIFRSLLYEACGRIVNPVDGSVGLMWSGNWAQCQAAVDAVLNGLPITHTPLPSASAS
pt042067_POPTR_ LRPAIFRSLLYEACGRIVNPVYGSVGMLWSGNWAQCQAAVDAVLKGSPIMSLPSSSEVPA
                ********************* ****::****************:* **   * .*  .:

AT1G68510.1     HQIIPPHRTYDIRHVAKDPTTGGDSSENLATRVNANKSKTQTGRFKRESVNQLGECSHDM
pt042067_POPTR_ PHLISSLNTYDIRHVPRDQ----DSPE-------LTKAKNQT-RFKRSIATRPNSQSE--
                 ::*.. .*******.:*     **.*        .*:*.** ****. ..: .. *.  

AT1G68510.1     WQLPSSSATHG-----------YGH--------------FTLENVESRREAPFNQSSPN-
pt042067_POPTR_ ---PTSRVNPGEWGFEPVRDSCLGHLGNRGSYIKDEDSIFSVETVEG---SLWSQVEPDS
                   *:* .. *            **              *::*.**.   : :.* .*: 

AT1G68510.1     -LGFDDQVDINEVGLELRLG----
pt042067_POPTR_ FFKFNGQGDGSDVRLDLTLGLVSE
                 : *:.* * .:* *:* **
BoxShade v3.31 C (beta, 970507) Output
AT1G68510.1     M R I S C N G C R V L R K G C N Q D C T I R P C L Q W I K S A D S Q A N A T L F L A K F Y G R A G L L N L I E S G P D H
pt042067_POPTR_    M R M S C N G C R V L R K G C S D N C T I R P C L Q W I K T P D S Q A N A T L F L A K F Y G R A G L V N L I E A G P P K
 
AT1G68510.1     L R P A I F R S L L Y E A C G R I V N P V D G S V G L M W S G N W A Q C Q A A V D A V L N G L P I T H T P L P S A S A S
pt042067_POPTR_    L R P A I F R S L L Y E A C G R I V N P V Y G S V G M L W S G N W A Q C Q A A V D A V L K G S P I M S L P S S S E V P A
 
AT1G68510.1     H Q I I P P H R T Y D I R H V A K D P T T G G D S S E N L A T R V N A N K S K T Q T G R F K R E S V N Q L G E C S H D M
pt042067_POPTR_    P H L I S S L N T Y D I R H V P R D Q - - - - D S P E - - - - - - - L T K A K N Q T - R F K R S I A T R P N S Q S E - -
 
AT1G68510.1     W Q L P S S S A T H G - - - - - - - - - - - Y G H - - - - - - - - - - - - - - F T L E N V E S R R E A P F N Q S S P N -
pt042067_POPTR_    - - - P T S R V N P G E W G F E P V R D S C L G H L G N R G S Y I K D E D S I F S V E T V E G - - - S L W S Q V E P D S
 
AT1G68510.1     - L G F D D Q V D I N E V G L E L R L G - - - -
pt042067_POPTR_    F F K F N G Q G D G S D V R L D L T L G L V S E
 
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