fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G68510.1 DINEVGLELRLG at 226/233 in AT1G68510.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt034504 QSDDSDLSLELTLALV in 229/241 AT1G68510.1 not_1st 0.449484536 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G68510.1     MRISCNGCRVLRKGCNQDCTIRPCLQWIKSADSQANATLFLAKFYGRAGLLNLIESGPDH
pt034504_POPTR_ --MSCNGCRVLRKGCNDNCTIRPCLQWIKSTDSQANATLFLAKFYGRAGLINLIEAAPQR
                  :*************::************:*******************:****:.*::

AT1G68510.1     LRPAIFRSLLYEACGRIVNPVDGSVGLMWSGNWAQCQAAVDAVLNGLPITHTPLPSASAS
pt034504_POPTR_ LRPAIFSSLLYEACGRIVNPVYGSVGMLWSGNWAQCQAAVDAVLKGLPIISIPSSDVPTP
                ****** ************** ****::****************:****   * ....:.

AT1G68510.1     HQIIPPHRTYDIRHVAKDPTTGGDSSENLATRVNANKSKTQ---------------TGRF
pt034504_POPTR_ H-LISSLNTYDIRHVSRDQNS---------PELNKVKSRTRCKRSIGTRPSSLAEPTGRL
                * :*.. .*******::* .:         ..:*  **:*:               ***:

AT1G68510.1     KRESVNQLG-ECSHDMWQLPSSSATHGYGH--------------FTLENVESRREAPFNQ
pt034504_POPTR_ NQ---GELGFEPVRESW----------LGHLGNGDSRIKDEDSILAAENVE---DSLWSR
                ::   .:** *  :: *           **              :: ****   :: :.:

AT1G68510.1     SSPN--LGFDDQVDINEVGLELRLG----
pt034504_POPTR_ VEPDQVFKFNGQSDDSDLSLELTLALVSE
                 .*:  : *:.* * .::.*** *.
BoxShade v3.31 C (beta, 970507) Output
AT1G68510.1     M R I S C N G C R V L R K G C N Q D C T I R P C L Q W I K S A D S Q A N A T L F L A K F Y G R A G L L N L I E S G P D H
pt034504_POPTR_    - - M S C N G C R V L R K G C N D N C T I R P C L Q W I K S T D S Q A N A T L F L A K F Y G R A G L I N L I E A A P Q R
 
AT1G68510.1     L R P A I F R S L L Y E A C G R I V N P V D G S V G L M W S G N W A Q C Q A A V D A V L N G L P I T H T P L P S A S A S
pt034504_POPTR_    L R P A I F S S L L Y E A C G R I V N P V Y G S V G M L W S G N W A Q C Q A A V D A V L K G L P I I S I P S S D V P T P
 
AT1G68510.1     H Q I I P P H R T Y D I R H V A K D P T T G G D S S E N L A T R V N A N K S K T Q - - - - - - - - - - - - - - - T G R F
pt034504_POPTR_    H - L I S S L N T Y D I R H V S R D Q N S - - - - - - - - - P E L N K V K S R T R C K R S I G T R P S S L A E P T G R L
 
AT1G68510.1     K R E S V N Q L G - E C S H D M W Q L P S S S A T H G Y G H - - - - - - - - - - - - - - F T L E N V E S R R E A P F N Q
pt034504_POPTR_    N Q - - - G E L G F E P V R E S W - - - - - - - - - - L G H L G N G D S R I K D E D S I L A A E N V E - - - D S L W S R
 
AT1G68510.1     S S P N - - L G F D D Q V D I N E V G L E L R L G - - - -
pt034504_POPTR_    V E P D Q V F K F N G Q S D D S D L S L E L T L A L V S E
 
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