fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G68510.1 DINEVGLELRLG at 226/233 in AT1G68510.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt000766 SNGISGLELGLDLTLG in 187/233 AT3G02550.1 not_not 0.459793814 III
Pt000765 SNGISGLELGLDLTLG in 250/296 AT3G02550.1 not_not 0.459793814 III
Pt019114 RNEIAGLGLDLALGLE in 174/221 AT3G02550.1 not_not 0.449484536 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G68510.1     MRISCNGCRVLRKGCNQDCTIRPCLQWIKSADSQANATLFLAKFYGRAGLLNLIESGPDH
pt019114_POPTR_ MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEH
pt000766_POPTR_ MRMSCNGCRVLRKGCSENCSIRPCLQWIKSSESQANATVFLAKFYGRAGLMNLINAGPEH
pt000765_POPTR_ MRMSCNGCRVLRKGCSENCSIRPCLQWIKSSESQANATVFLAKFYGRAGLMNLINAGPEH
                **:************.::*:**********.:******:***********:***::**:*

AT1G68510.1     LRPAIFRSLLYEACGRIVNPVDGSVGLMWSGNWAQCQAAVDAVLNGLPITHTPLPSASAS
pt019114_POPTR_ LRPAIFRSLLYEACGRIVNPIYGSVGLMWSGSWPLCQAAVEAVLRGASI--TQINSETAA
pt000766_POPTR_ LRPAIFRSLLYEACGRIVNPIYGSVGLMWSGSWQLCQAAVEAVLKGAPI--TPINSEAAV
pt000765_POPTR_ LRPAIFRSLLYEACGRIVNPIYGSVGLMWSGSWQLCQAAVEAVLKGAPI--TPINSEAAV
                ********************: *********.*  *****:***.* .*  * : * :* 

AT1G68510.1     HQIIPPHRTYDIRHVAKDPTTGGDSSENLATRVNANKSKTQT------------------
pt019114_POPTR_ NAQGPPLKAYDIRHVSKD--------ENSAASNDANRVRTRCR-----------------
pt000766_POPTR_ NGHGPPLKVYDIRHVSKE--------ENSAASNDANRARTRCR-----------------
pt000765_POPTR_ NGHGPPLKVYDIRHVSKE--------ENSAASNDANRARTRCRVRRVVKPKASKRACFGN
                :   ** :.******:*:        ** *:  :**: :*:                   

AT1G68510.1     -----------------------GRFKRESVNQLGEC-----------------------
pt019114_POPTR_ -----------------------SRVLGESPIRVGNG-----------------------
pt000766_POPTR_ -----------------------SSVSHQSELAVLDGDSKESDESM--------------
pt000765_POPTR_ GLASIAVDTLSARDELTRCTSHESSVSHQSELAVLDGDSKESDESMVSVETAEASLLFPP
                                       . .  :*   : :                        

AT1G68510.1     ---------SHD----------------MWQLPSSSATHGYGHFTLENVESRREAPFNQS
pt019114_POPTR_ -------------GRNEIAG--LGLDLALGLEPVSRAHH------VVPVKKRRIEALGSG
pt000766_POPTR_ ---------AHDVASNGISGLELGLDLTLGLEPVSRAHH------VVPVKKRRVEAYGSG
pt000765_POPTR_ NPESKNDCKAHDVASNGISGLELGLDLTLGLEPVSRAHH------VVPVKKRRVEAYGSG
                                            :   * * * *      :  *:.**  . ...

AT1G68510.1     SPNLGFDDQVDINEVGLELRLG---
pt019114_POPTR_ ----------DIDTCKMELGLDYAA
pt000766_POPTR_ ----------DVDTCKMELRLE---
pt000765_POPTR_ ----------DVDTCKMELRLE---
                          *::   :** *
BoxShade v3.31 C (beta, 970507) Output
AT1G68510.1     M R I S C N G C R V L R K G C N Q D C T I R P C L Q W I K S A D S Q A N A T L F L A K F Y G R A G L L N L I E S G P D H
pt019114_POPTR_    M R M S C N G C R V L R K G C S E N C S I R P C L Q W I K S P E S Q A N A T V F L A K F Y G R A G L M N L I N A G P E H
pt000766_POPTR_    M R M S C N G C R V L R K G C S E N C S I R P C L Q W I K S S E S Q A N A T V F L A K F Y G R A G L M N L I N A G P E H
pt000765_POPTR_    M R M S C N G C R V L R K G C S E N C S I R P C L Q W I K S S E S Q A N A T V F L A K F Y G R A G L M N L I N A G P E H
 
AT1G68510.1     L R P A I F R S L L Y E A C G R I V N P V D G S V G L M W S G N W A Q C Q A A V D A V L N G L P I T H T P L P S A S A S
pt019114_POPTR_    L R P A I F R S L L Y E A C G R I V N P I Y G S V G L M W S G S W P L C Q A A V E A V L R G A S I - - T Q I N S E T A A
pt000766_POPTR_    L R P A I F R S L L Y E A C G R I V N P I Y G S V G L M W S G S W Q L C Q A A V E A V L K G A P I - - T P I N S E A A V
pt000765_POPTR_    L R P A I F R S L L Y E A C G R I V N P I Y G S V G L M W S G S W Q L C Q A A V E A V L K G A P I - - T P I N S E A A V
 
AT1G68510.1     H Q I I P P H R T Y D I R H V A K D P T T G G D S S E N L A T R V N A N K S K T Q T - - - - - - - - - - - - - - - - - -
pt019114_POPTR_    N A Q G P P L K A Y D I R H V S K D - - - - - - - - E N S A A S N D A N R V R T R C R - - - - - - - - - - - - - - - - -
pt000766_POPTR_    N G H G P P L K V Y D I R H V S K E - - - - - - - - E N S A A S N D A N R A R T R C R - - - - - - - - - - - - - - - - -
pt000765_POPTR_    N G H G P P L K V Y D I R H V S K E - - - - - - - - E N S A A S N D A N R A R T R C R V R R V V K P K A S K R A C F G N
 
AT1G68510.1     - - - - - - - - - - - - - - - - - - - - - - - G R F K R E S V N Q L G E C - - - - - - - - - - - - - - - - - - - - - - -
pt019114_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - S R V L G E S P I R V G N G - - - - - - - - - - - - - - - - - - - - - - -
pt000766_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - S S V S H Q S E L A V L D G D S K E S D E S M - - - - - - - - - - - - - -
pt000765_POPTR_    G L A S I A V D T L S A R D E L T R C T S H E S S V S H Q S E L A V L D G D S K E S D E S M V S V E T A E A S L L F P P
 
AT1G68510.1     - - - - - - - - - S H D - - - - - - - - - - - - - - - - M W Q L P S S S A T H G Y G H F T L E N V E S R R E A P F N Q S
pt019114_POPTR_    - - - - - - - - - - - - - G R N E I A G - - L G L D L A L G L E P V S R A H H - - - - - - V V P V K K R R I E A L G S G
pt000766_POPTR_    - - - - - - - - - A H D V A S N G I S G L E L G L D L T L G L E P V S R A H H - - - - - - V V P V K K R R V E A Y G S G
pt000765_POPTR_    N P E S K N D C K A H D V A S N G I S G L E L G L D L T L G L E P V S R A H H - - - - - - V V P V K K R R V E A Y G S G
 
AT1G68510.1     S P N L G F D D Q V D I N E V G L E L R L G - - -
pt019114_POPTR_    - - - - - - - - - - D I D T C K M E L G L D Y A A
pt000766_POPTR_    - - - - - - - - - - D V D T C K M E L R L E - - -
pt000765_POPTR_    - - - - - - - - - - D V D T C K M E L R L E - - -
 
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