fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G68510.1 DINEVGLELRLG at 226/233 in AT1G68510.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb007439 RAAEDGLDLTLGLPLA in 261/297 AT1G67100.1 1st_not 0.439175257 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G68510.1     MRISCNGCRVLRKGCNQDCTIRPCLQWIKSADSQANATLFLAKFYGRAGLLNLIESGPDH
Sb007439_Sorbi1 MRMSCNGCRVLRKGCSDNCAIRPCLQWIRSPDAQGNATVFLAKFYGRAGLINLITAGPEH
                **:************.::*:********:*.*:*.***:***********:*** :**:*

AT1G68510.1     LRPAIFRSLLYEACGRIVNPVDGSVGLMWSGNWAQCQAAVDAVLNGLPITHTPLPSASAS
Sb007439_Sorbi1 VRPAIFRSLLYEACGRMLNPVYGSVGLLWSGNWQLCQAAVESVLRGMPIAQPPPLAATA-
                :***************::*** *****:*****  *****::**.*:**::.*  :*:* 

AT1G68510.1     HQIIPPHRTYDIRHVAKDPTTGG-------DSSENLATRVNANKSKTQTGRFKRESVNQL
Sb007439_Sorbi1 ---VPPLRSCDIRHVSRREAAGRGAGAGAVDAAGPGGLHRMANSSR---GQFKRSGAHRS
                   :** *: *****::  ::*        *::   . :  **.*:   *:***...:: 

AT1G68510.1     GECSHDM--WQLPSSSA------------------THGYGHFTLENVESRREAPFNQSSP
Sb007439_Sorbi1 GDSGIELVFSQPPSASSMLVDIRQAQPLNWAPRQPSHEYSASHDDDGGAVRESDSNASV-
                *:.. ::   * **:*:                  :* *.    ::  : **:  * *  

AT1G68510.1     NLGFDDQVDINEV--------------------GLELRLG--------------------
Sb007439_Sorbi1 -----DTVDVSHVSQSEPAEPPRESHDERAAEDGLDLTLGLPLAHKVEPSDVDDDQPCHR
                     * **:..*                    **:* **                    

AT1G68510.1     ----------
Sb007439_Sorbi1 GGEPMKNWAW
BoxShade v3.31 C (beta, 970507) Output
AT1G68510.1     M R I S C N G C R V L R K G C N Q D C T I R P C L Q W I K S A D S Q A N A T L F L A K F Y G R A G L L N L I E S G P D H
Sb007439_Sorbi1    M R M S C N G C R V L R K G C S D N C A I R P C L Q W I R S P D A Q G N A T V F L A K F Y G R A G L I N L I T A G P E H
 
AT1G68510.1     L R P A I F R S L L Y E A C G R I V N P V D G S V G L M W S G N W A Q C Q A A V D A V L N G L P I T H T P L P S A S A S
Sb007439_Sorbi1    V R P A I F R S L L Y E A C G R M L N P V Y G S V G L L W S G N W Q L C Q A A V E S V L R G M P I A Q P P P L A A T A -
 
AT1G68510.1     H Q I I P P H R T Y D I R H V A K D P T T G G - - - - - - - D S S E N L A T R V N A N K S K T Q T G R F K R E S V N Q L
Sb007439_Sorbi1    - - - V P P L R S C D I R H V S R R E A A G R G A G A G A V D A A G P G G L H R M A N S S R - - - G Q F K R S G A H R S
 
AT1G68510.1     G E C S H D M - - W Q L P S S S A - - - - - - - - - - - - - - - - - - T H G Y G H F T L E N V E S R R E A P F N Q S S P
Sb007439_Sorbi1    G D S G I E L V F S Q P P S A S S M L V D I R Q A Q P L N W A P R Q P S H E Y S A S H D D D G G A V R E S D S N A S V -
 
AT1G68510.1     N L G F D D Q V D I N E V - - - - - - - - - - - - - - - - - - - - G L E L R L G - - - - - - - - - - - - - - - - - - - -
Sb007439_Sorbi1    - - - - - D T V D V S H V S Q S E P A E P P R E S H D E R A A E D G L D L T L G L P L A H K V E P S D V D D D Q P C H R
 
AT1G68510.1     - - - - - - - - - -
Sb007439_Sorbi1    G G E P M K N W A W
 
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