Input
| Putative repression domain
|
|
AT1G68520.1 |
EKKEKALMLRLDYESV at 287/406 in AT1G68520.1 |
|
HNHFRGLGLHLGDAGD at 343/406 in AT1G68520.1 |
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt034174 |
not found in 447aa |
AT1G68520.1 |
1st_1st |
0.391188251 |
Ib |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT1G68520.1 MM--KSLASAVGGKTARACDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERVR
pt034174_POPTR_ MICNKSLANAVGGRTARACDSCIKKRASWYCAADDAFLCQACDSSVHSANLLARRHERVR
*: ****.****:********:*:** ***********:***.****** *********
AT1G68520.1 LKSAS-----AGKYRHASPPHQATWHQGFTRKARTPRGGKKSHTMVFHD--------LVP
pt034174_POPTR_ LKSASLKSSDAGSKENSMP----SWHGGFTRKARTPRHGKPVSRSKIEETTRNIPIPLVP
***** **. .:: * :** ********** ** :.: ***
AT1G68520.1 EMSTEDQAESYEVEEQLIFEVPVMNSMVEEQCFNQSLEKQNEF-PMMPLSFKSSDEE--D
pt034174_POPTR_ EVGSDEISLEDNEEEHLLYRVPIFDPFAAELCTSTTV--SNEAGAVVPAGGTDTDQRAAD
*:.::: : . : **:*::.**:::.:. * * . :: .** .::* . ..:*:. *
AT1G68520.1 DDNAES-------------CLNGLFPTDMELAQFTADVETLLGGG-DREFHSIEELGLGE
pt034174_POPTR_ SSGTESKVLLGGSEGKDVESLHGFLPSDMDLAEFAADMESLLGRGLENESFGMEELGLMD
...:** .*:*::*:**:**:*:**:*:*** * :.* ..:***** :
AT1G68520.1 -----------------MLKIEKEE---VEEEGVVTREVHDQDEGD--ETSPFEISFDYE
pt034174_POPTR_ CKEENELGVKGYPLGNGKVKVEEEEDAGMEEKAV--RECHADIEIDIAKDPPFELSFDYD
:*:*:** :**:.* ** * : * * : .***:****:
AT1G68520.1 YTHKTTFDEGEEDEK----EDVMKNVMEMGVNEMSGGIKEEKKEKALMLRLDYESVISTW
pt034174_POPTR_ SPATCV----EEDEKVGIEEGDLKN--SDGEYEDDGG---AKKKRRTLLSLDYEAVMTAW
. . . ***** *. :** . * * .** **:: :* ****:*:::*
AT1G68520.1 GGQGIPWTARVPSEIDLDMVCFP-THTMGESGAEAHH-HNHFRGLGLHLGDAGDGGREAR
pt034174_POPTR_ ASQGSPWTNGYRPDFDADE-CWPDADCMGICGAQLHHPYGDVSGLGAHPAALVDGGREAR
..** *** .::* * *:* :. ** .**: ** :... *** * . *******
AT1G68520.1 VSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRSSIGVAH
pt034174_POPTR_ VSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTTFAGK-
***************************************:::.
BoxShade v3.31 C (beta, 970507) Output
AT1G68520.1 |
M |
M |
- |
- |
K |
S |
L |
A |
S |
A |
V |
G |
G |
K |
T |
A |
R |
A |
C |
D |
S |
C |
V |
K |
R |
R |
A |
R |
W |
Y |
C |
A |
A |
D |
D |
A |
F |
L |
C |
H |
A |
C |
D |
G |
S |
V |
H |
S |
A |
N |
P |
L |
A |
R |
R |
H |
E |
R |
V |
R |
pt034174_POPTR_ |
M |
I |
C |
N |
K |
S |
L |
A |
N |
A |
V |
G |
G |
R |
T |
A |
R |
A |
C |
D |
S |
C |
I |
K |
K |
R |
A |
S |
W |
Y |
C |
A |
A |
D |
D |
A |
F |
L |
C |
Q |
A |
C |
D |
S |
S |
V |
H |
S |
A |
N |
L |
L |
A |
R |
R |
H |
E |
R |
V |
R |
|
AT1G68520.1 |
L |
K |
S |
A |
S |
- |
- |
- |
- |
- |
A |
G |
K |
Y |
R |
H |
A |
S |
P |
P |
H |
Q |
A |
T |
W |
H |
Q |
G |
F |
T |
R |
K |
A |
R |
T |
P |
R |
G |
G |
K |
K |
S |
H |
T |
M |
V |
F |
H |
D |
- |
- |
- |
- |
- |
- |
- |
- |
L |
V |
P |
pt034174_POPTR_ |
L |
K |
S |
A |
S |
L |
K |
S |
S |
D |
A |
G |
S |
K |
E |
N |
S |
M |
P |
- |
- |
- |
- |
S |
W |
H |
G |
G |
F |
T |
R |
K |
A |
R |
T |
P |
R |
H |
G |
K |
P |
V |
S |
R |
S |
K |
I |
E |
E |
T |
T |
R |
N |
I |
P |
I |
P |
L |
V |
P |
|
AT1G68520.1 |
E |
M |
S |
T |
E |
D |
Q |
A |
E |
S |
Y |
E |
V |
E |
E |
Q |
L |
I |
F |
E |
V |
P |
V |
M |
N |
S |
M |
V |
E |
E |
Q |
C |
F |
N |
Q |
S |
L |
E |
K |
Q |
N |
E |
F |
- |
P |
M |
M |
P |
L |
S |
F |
K |
S |
S |
D |
E |
E |
- |
- |
D |
pt034174_POPTR_ |
E |
V |
G |
S |
D |
E |
I |
S |
L |
E |
D |
N |
E |
E |
E |
H |
L |
L |
Y |
R |
V |
P |
I |
F |
D |
P |
F |
A |
A |
E |
L |
C |
T |
S |
T |
T |
V |
- |
- |
S |
N |
E |
A |
G |
A |
V |
V |
P |
A |
G |
G |
T |
D |
T |
D |
Q |
R |
A |
A |
D |
|
AT1G68520.1 |
D |
D |
N |
A |
E |
S |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
C |
L |
N |
G |
L |
F |
P |
T |
D |
M |
E |
L |
A |
Q |
F |
T |
A |
D |
V |
E |
T |
L |
L |
G |
G |
G |
- |
D |
R |
E |
F |
H |
S |
I |
E |
E |
L |
G |
L |
G |
E |
pt034174_POPTR_ |
S |
S |
G |
T |
E |
S |
K |
V |
L |
L |
G |
G |
S |
E |
G |
K |
D |
V |
E |
S |
L |
H |
G |
F |
L |
P |
S |
D |
M |
D |
L |
A |
E |
F |
A |
A |
D |
M |
E |
S |
L |
L |
G |
R |
G |
L |
E |
N |
E |
S |
F |
G |
M |
E |
E |
L |
G |
L |
M |
D |
|
AT1G68520.1 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
M |
L |
K |
I |
E |
K |
E |
E |
- |
- |
- |
V |
E |
E |
E |
G |
V |
V |
T |
R |
E |
V |
H |
D |
Q |
D |
E |
G |
D |
- |
- |
E |
T |
S |
P |
F |
E |
I |
S |
F |
D |
Y |
E |
pt034174_POPTR_ |
C |
K |
E |
E |
N |
E |
L |
G |
V |
K |
G |
Y |
P |
L |
G |
N |
G |
K |
V |
K |
V |
E |
E |
E |
E |
D |
A |
G |
M |
E |
E |
K |
A |
V |
- |
- |
R |
E |
C |
H |
A |
D |
I |
E |
I |
D |
I |
A |
K |
D |
P |
P |
F |
E |
L |
S |
F |
D |
Y |
D |
|
AT1G68520.1 |
Y |
T |
H |
K |
T |
T |
F |
D |
E |
G |
E |
E |
D |
E |
K |
- |
- |
- |
- |
E |
D |
V |
M |
K |
N |
V |
M |
E |
M |
G |
V |
N |
E |
M |
S |
G |
G |
I |
K |
E |
E |
K |
K |
E |
K |
A |
L |
M |
L |
R |
L |
D |
Y |
E |
S |
V |
I |
S |
T |
W |
pt034174_POPTR_ |
S |
P |
A |
T |
C |
V |
- |
- |
- |
- |
E |
E |
D |
E |
K |
V |
G |
I |
E |
E |
G |
D |
L |
K |
N |
- |
- |
S |
D |
G |
E |
Y |
E |
D |
D |
G |
G |
- |
- |
- |
A |
K |
K |
K |
R |
R |
T |
L |
L |
S |
L |
D |
Y |
E |
A |
V |
M |
T |
A |
W |
|
AT1G68520.1 |
G |
G |
Q |
G |
I |
P |
W |
T |
A |
R |
V |
P |
S |
E |
I |
D |
L |
D |
M |
V |
C |
F |
P |
- |
T |
H |
T |
M |
G |
E |
S |
G |
A |
E |
A |
H |
H |
- |
H |
N |
H |
F |
R |
G |
L |
G |
L |
H |
L |
G |
D |
A |
G |
D |
G |
G |
R |
E |
A |
R |
pt034174_POPTR_ |
A |
S |
Q |
G |
S |
P |
W |
T |
N |
G |
Y |
R |
P |
D |
F |
D |
A |
D |
E |
- |
C |
W |
P |
D |
A |
D |
C |
M |
G |
I |
C |
G |
A |
Q |
L |
H |
H |
P |
Y |
G |
D |
V |
S |
G |
L |
G |
A |
H |
P |
A |
A |
L |
V |
D |
G |
G |
R |
E |
A |
R |
|
AT1G68520.1 |
V |
S |
R |
Y |
R |
E |
K |
R |
R |
T |
R |
L |
F |
S |
K |
K |
I |
R |
Y |
E |
V |
R |
K |
L |
N |
A |
E |
K |
R |
P |
R |
M |
K |
G |
R |
F |
V |
K |
R |
S |
S |
I |
G |
V |
A |
H |
pt034174_POPTR_ |
V |
S |
R |
Y |
R |
E |
K |
R |
R |
T |
R |
L |
F |
S |
K |
K |
I |
R |
Y |
E |
V |
R |
K |
L |
N |
A |
E |
K |
R |
P |
R |
M |
K |
G |
R |
F |
V |
K |
R |
T |
T |
F |
A |
G |
K |
- |
|
|