fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G68670.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt034451 not found in 390aa AT1G25550.1 not_not 0.513307984 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G68670.1     MMVEMDYAKKMQKCHEYVEALEEEQKKIQVFQRELPLCLELVTQAIEACRKELSGTTTTT
pt034451_POPTR_ ----MDFAEKMQRCHEYVEALEEERRKIQVFERELPLCLELVTQAIEACKRELSGTTEDH
                    **:*:***:***********::*****:*****************::******   

AT1G68670.1     S----EQCSEQTTSVCGGPVFEEFIPIKKISSLCEEVQEEEEEDGEHE------------
pt034451_POPTR_ NMHGQSECSEQTSS--EGPVLEEFIPIKRTHSSDDEENDNNHDDDDHQEQQSQNDNKRNK
                .    .:*****:*   ***:*******:  *  :* ::::.:*.:*:            

AT1G68670.1     SSPELVNN---KKSDWLRSVQLWNHSPDLNPKEERVAKKAKVVEVKPK--SGAFQPF--Q
pt034451_POPTR_ SNSSISNNDHKKKSDWLRSVQLWNQSPD-PPQKQDLPRKAAVTEVKRNGAGGAFQPFHRE
                *...: **   *************:***  *::: :.:** *.*** :  .******  :

AT1G68670.1     KRVLETDLQPAVKVASSMPATTTSS-----TTETCGGKSDLIKAGDEERRIEQQQSQSHT
pt034451_POPTR_ KSVGKSSNQAISKAPPSVPASATSSIAGAVTGGTGGGGN---KKEDKEK---------GN
                * * ::. *.  *...*:**::***     *  * ** .   *  *:*:          .

AT1G68670.1     HRKQRRCWSPELHRRFLNALQQLGGSHVATPKQIRDHMKVDGLTNDEVKSHLQKYRLHTR
pt034451_POPTR_ QRKQRRCWSPELHRRFLHSLQQLGGSHAATPKQIRELMKVDGLTNDEVKSHLQKYRLHTR
                :****************::********.*******: ***********************

AT1G68670.1     RPAATSVAAQSTGNQQQPQFVVVGGIWVPSSQ--------DFPPPSDVANKGGVYAPVAV
pt034451_POPTR_ RPSPT---IHTNSSQQAPQFVVVGGIWVPPTEYAAVAATTTAGETSTISAANGIYAPIAA
                **:.*    ::...** ************.::            .* ::  .*:***:*.

AT1G68670.1     ----------------AQSPKRSL--ER----SCNSPAASSSTNTNTSTPVS
pt034451_POPTR_ PPPAVPQNRQHKQSEHSQSEGRGSHGERGGAHSNNSPATSSSTHTTTTSPVF
                                :**  *.   **    * ****:****:*.*::**
BoxShade v3.31 C (beta, 970507) Output
AT1G68670.1     M M V E M D Y A K K M Q K C H E Y V E A L E E E Q K K I Q V F Q R E L P L C L E L V T Q A I E A C R K E L S G T T T T T
pt034451_POPTR_    - - - - M D F A E K M Q R C H E Y V E A L E E E R R K I Q V F E R E L P L C L E L V T Q A I E A C K R E L S G T T E D H
 
AT1G68670.1     S - - - - E Q C S E Q T T S V C G G P V F E E F I P I K K I S S L C E E V Q E E E E E D G E H E - - - - - - - - - - - -
pt034451_POPTR_    N M H G Q S E C S E Q T S S - - E G P V L E E F I P I K R T H S S D D E E N D N N H D D D D H Q E Q Q S Q N D N K R N K
 
AT1G68670.1     S S P E L V N N - - - K K S D W L R S V Q L W N H S P D L N P K E E R V A K K A K V V E V K P K - - S G A F Q P F - - Q
pt034451_POPTR_    S N S S I S N N D H K K K S D W L R S V Q L W N Q S P D - P P Q K Q D L P R K A A V T E V K R N G A G G A F Q P F H R E
 
AT1G68670.1     K R V L E T D L Q P A V K V A S S M P A T T T S S - - - - - T T E T C G G K S D L I K A G D E E R R I E Q Q Q S Q S H T
pt034451_POPTR_    K S V G K S S N Q A I S K A P P S V P A S A T S S I A G A V T G G T G G G G N - - - K K E D K E K - - - - - - - - - G N
 
AT1G68670.1     H R K Q R R C W S P E L H R R F L N A L Q Q L G G S H V A T P K Q I R D H M K V D G L T N D E V K S H L Q K Y R L H T R
pt034451_POPTR_    Q R K Q R R C W S P E L H R R F L H S L Q Q L G G S H A A T P K Q I R E L M K V D G L T N D E V K S H L Q K Y R L H T R
 
AT1G68670.1     R P A A T S V A A Q S T G N Q Q Q P Q F V V V G G I W V P S S Q - - - - - - - - D F P P P S D V A N K G G V Y A P V A V
pt034451_POPTR_    R P S P T - - - I H T N S S Q Q A P Q F V V V G G I W V P P T E Y A A V A A T T T A G E T S T I S A A N G I Y A P I A A
 
AT1G68670.1     - - - - - - - - - - - - - - - - A Q S P K R S L - - E R - - - - S C N S P A A S S S T N T N T S T P V S
pt034451_POPTR_    P P P A V P Q N R Q H K Q S E H S Q S E G R G S H G E R G G A H S N N S P A T S S S T H T T T T S P V F
 
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