fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G68670.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm028285 not found in 383aa AT1G25550.1 not_not 0.404942965 III
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G68670.1     --MMVEMDYAKKMQKCHEYVEALEEEQKKIQVFQRELPLCLELVTQAIEACRKELSGTTT
gm028285_Glyma1 MYFFTEKMHSLKM-GFPDYIQTLEEERRKIQVFSKELPLSLELVTQAIEACKQQLSGTAS
                  ::.*  :: **    :*:::****::*****.:****.***********:::****::

AT1G68670.1     TTS----EQCSEQTTSVCGGPVFEEFIPIKKISS---LCEEVQEEEEEDGEHESSPELV-
gm028285_Glyma1 EYNLNGHSECSEQTTST-EGPVLEEFIPIKKMASSSPFC----DEEDEDDEQHSHKQRVS
                  .    .:*******.  ***:********::*   :*    :**:**.*:.*  : * 

AT1G68670.1     ---NN---KKSDWLRSVQLWNHSPDLNPKEERVAKKAKVVEVKPK---SGAFQPFQKRVL
gm028285_Glyma1 KENNNSDKRKSDWLRSVQLWNPDP---PAEEDVNKKVPGLELKRSGNGGGAFQPFHKE--
                   **   :************ .*   * ** * **.  :*:* .   .******:*.  

AT1G68670.1     ETDLQPAVKVASSMPATTTSSTTETCGGKSDLIKAGDEERRIEQQQSQSHTHRKQRRCWS
gm028285_Glyma1 ----ERGAKTSESL--SKAPSSTSVAAASSSAAEPAAE-------KSLNEGHRKQRRCWS
                    : ..*.:.*:  :.:.*:*......*.  :.. *       :* .. *********

AT1G68670.1     PELHRRFLNALQQLGGSHVATPKQIRDHMKVDGLTNDEVKSHLQKYRLHTRRPAATSVAA
gm028285_Glyma1 QDLHKRFLHALQQLGGADTATPKQIREIMNVDGLTNDEVKSHLQKYRLHTRRP---SPMV
                 :**:***:*******:..*******: *:***********************   *  .

AT1G68670.1     QSTGNQQQPQFVVVGGIWVPSSQDFPPPSDVANK--------GGVYAPVA-----VAQSP
gm028285_Glyma1 HNSSNPQAAPFVLVGNIFVQSPEYAAVATSTASREVATVAAPAGIYAPVATHPIPVSHPP
                :.:.* * . **:**.*:* *.:  . .:..*.:        .*:*****     *::.*

AT1G68670.1     KRSL-----------------ERS--------CNSPAASSSTNTNTSTPVS
gm028285_Glyma1 ADSIKNPQFKKVQLFEHSISDERANHSEGAVHSNSPTSSSSTHTSTSLGY-
                  *:                 **:        .***::****:*.**
BoxShade v3.31 C (beta, 970507) Output
AT1G68670.1     - - M M V E M D Y A K K M Q K C H E Y V E A L E E E Q K K I Q V F Q R E L P L C L E L V T Q A I E A C R K E L S G T T T
gm028285_Glyma1    M Y F F T E K M H S L K M - G F P D Y I Q T L E E E R R K I Q V F S K E L P L S L E L V T Q A I E A C K Q Q L S G T A S
 
AT1G68670.1     T T S - - - - E Q C S E Q T T S V C G G P V F E E F I P I K K I S S - - - L C E E V Q E E E E E D G E H E S S P E L V -
gm028285_Glyma1    E Y N L N G H S E C S E Q T T S T - E G P V L E E F I P I K K M A S S S P F C - - - - D E E D E D D E Q H S H K Q R V S
 
AT1G68670.1     - - - N N - - - K K S D W L R S V Q L W N H S P D L N P K E E R V A K K A K V V E V K P K - - - S G A F Q P F Q K R V L
gm028285_Glyma1    K E N N N S D K R K S D W L R S V Q L W N P D P - - - P A E E D V N K K V P G L E L K R S G N G G G A F Q P F H K E - -
 
AT1G68670.1     E T D L Q P A V K V A S S M P A T T T S S T T E T C G G K S D L I K A G D E E R R I E Q Q Q S Q S H T H R K Q R R C W S
gm028285_Glyma1    - - - - E R G A K T S E S L - - S K A P S S T S V A A A S S S A A E P A A E - - - - - - - K S L N E G H R K Q R R C W S
 
AT1G68670.1     P E L H R R F L N A L Q Q L G G S H V A T P K Q I R D H M K V D G L T N D E V K S H L Q K Y R L H T R R P A A T S V A A
gm028285_Glyma1    Q D L H K R F L H A L Q Q L G G A D T A T P K Q I R E I M N V D G L T N D E V K S H L Q K Y R L H T R R P - - - S P M V
 
AT1G68670.1     Q S T G N Q Q Q P Q F V V V G G I W V P S S Q D F P P P S D V A N K - - - - - - - - G G V Y A P V A - - - - - V A Q S P
gm028285_Glyma1    H N S S N P Q A A P F V L V G N I F V Q S P E Y A A V A T S T A S R E V A T V A A P A G I Y A P V A T H P I P V S H P P
 
AT1G68670.1     K R S L - - - - - - - - - - - - - - - - - E R S - - - - - - - - C N S P A A S S S T N T N T S T P V S
gm028285_Glyma1    A D S I K N P Q F K K V Q L F E H S I S D E R A N H S E G A V H S N S P T S S S S T H T S T S L G Y -
 
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