fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G68810.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt033709 not found in 359aa AT1G68810.1 1st_1st 0.490942028 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G68810.1     MCAKKEEEEEEEEDSSEAMNNIQNYQNDLF--FHQLISHHHHHHHDPSQSETLGASGNVG
pt033709_POPTR_ MCGLKEEDQGE---CSQTIHNLQNYQEQLLLQYHQQMQQHQQQQ----SSDIYG--GARG
                **. ***:: *   .*::::*:****::*:  :** :.:*::::    .*:  *  *  *

AT1G68810.1     SGFTIFSQDSVSPI--WSLPPPTSIQP-------------PFDQFPPPSSSPASFYGSFF
pt033709_POPTR_ SGF-IFPE--VSPILPWPLPPVHSFNPAHFTPNHPVRDHDPF-LIPPP--VPSS-YGGLF
                *** **.:  ****  *.***  *::*             **  :***   *:* **.:*

AT1G68810.1     NRSRAHHQGLQFGYEGFGGATSAAHHHHEQLRILSEALGPVVQAGSGPFGLQAELGKMTA
pt033709_POPTR_ NR-RA--PSLQFAYDG----TPSDH-----LRIISDTLGPVVQPGSAPFGLQAELSKMTA
                ** **   .***.*:*    *.: *     ***:*::******.**.********.****

AT1G68810.1     QEIMDAKALAASKSHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKELK
pt033709_POPTR_ QEIMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELK
                ***********************************:**.*********************

AT1G68810.1     RETSVISETNLVPTESDELTVAFTEEEETGDGRFVIKASLCCEDRSDLLPDMIKTLKAMR
pt033709_POPTR_ RQTTLIAETSPVPTEMDELTVDTADE----DGKFVIKASLCCEDRPDLLPDLIKTLKALR
                *:*::*:**. **** *****  ::*    **:************.*****:******:*

AT1G68810.1     LKTLKAEITTVGGRVKNVLFVTGEESSGEEVEE--------EYCIGTIEEALKAVMEKSN
pt033709_POPTR_ LRTLKAEITTLGGRVKNVLFISGEEDSSSDSNDQHQQQEPLQYSISSIQEALKAVMEKTG
                *:********:*********::***.*..: ::        :*.*.:*:*********:.

AT1G68810.1     VEESSSSGNAKRQRMSSHNTITIVEQQQQYNQR---
pt033709_POPTR_ GDE-SSSGSVKRQRTN----INLLEQQQQQQQHRSL
                 :* ****..**** .    *.::***** :*:
BoxShade v3.31 C (beta, 970507) Output
AT1G68810.1     M C A K K E E E E E E E E D S S E A M N N I Q N Y Q N D L F - - F H Q L I S H H H H H H H D P S Q S E T L G A S G N V G
pt033709_POPTR_    M C G L K E E D Q G E - - - C S Q T I H N L Q N Y Q E Q L L L Q Y H Q Q M Q Q H Q Q Q Q - - - - S S D I Y G - - G A R G
 
AT1G68810.1     S G F T I F S Q D S V S P I - - W S L P P P T S I Q P - - - - - - - - - - - - - P F D Q F P P P S S S P A S F Y G S F F
pt033709_POPTR_    S G F - I F P E - - V S P I L P W P L P P V H S F N P A H F T P N H P V R D H D P F - L I P P P - - V P S S - Y G G L F
 
AT1G68810.1     N R S R A H H Q G L Q F G Y E G F G G A T S A A H H H H E Q L R I L S E A L G P V V Q A G S G P F G L Q A E L G K M T A
pt033709_POPTR_    N R - R A - - P S L Q F A Y D G - - - - T P S D H - - - - - L R I I S D T L G P V V Q P G S A P F G L Q A E L S K M T A
 
AT1G68810.1     Q E I M D A K A L A A S K S H S E A E R R R R E R I N N H L A K L R S I L P N T T K T D K A S L L A E V I Q H V K E L K
pt033709_POPTR_    Q E I M D A K A L A A S K S H S E A E R R R R E R I N N H L A K L R S L L P S T T K T D K A S L L A E V I Q H V K E L K
 
AT1G68810.1     R E T S V I S E T N L V P T E S D E L T V A F T E E E E T G D G R F V I K A S L C C E D R S D L L P D M I K T L K A M R
pt033709_POPTR_    R Q T T L I A E T S P V P T E M D E L T V D T A D E - - - - D G K F V I K A S L C C E D R P D L L P D L I K T L K A L R
 
AT1G68810.1     L K T L K A E I T T V G G R V K N V L F V T G E E S S G E E V E E - - - - - - - - E Y C I G T I E E A L K A V M E K S N
pt033709_POPTR_    L R T L K A E I T T L G G R V K N V L F I S G E E D S S S D S N D Q H Q Q Q E P L Q Y S I S S I Q E A L K A V M E K T G
 
AT1G68810.1     V E E S S S S G N A K R Q R M S S H N T I T I V E Q Q Q Q Y N Q R - - -
pt033709_POPTR_    G D E - S S S G S V K R Q R T N - - - - I N L L E Q Q Q Q Q Q Q H R S L
 
0