fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G68840.1 VQVVVRLFGVDIFNV at 304/352 in AT1G68840.1
VQVVVRLFGVDIFNV at 304/352 in AT1G68840.2
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt042964 PIQMVRLFGVNIFNV in 325/369 AT1G25560.1 not_not 0.626356589 III
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G68840.1     MDSSCIDE-ISSSTSESFSAT-TAKKLSPPPAAALR-----LYRMGSGGSSVVLDPENGL
pt042964_POPTR_ MDGSCVDESTTSSTDNSISITPTSLTPSPPPATTTKSPPESLCRVGS-GNSVILDLELGV
                **.**:**  :***.:*:* * *: . *****:: :     * *:** *.**:** * *:

AT1G68840.1     ETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEQEEAARSYDIAACRFRGRD
pt042964_POPTR_ EAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDTAAQRFRGRD
                *:***************************************::****:** ** ******

AT1G68840.1     AVVNFKNVLEDGD----LAFLEAHSKAEIVDMLRKHTYADELEQNNKRQLFLSVDANGK-
pt042964_POPTR_ AVTNFKQVNETEDDEIEAAFLITHSKAEIVDMLRKHTYSDELEQ-SKRNQRSNNGVNGKQ
                **.***:* *  *     *** :***************:***** .**:   . ..*** 

AT1G68840.1     -RNGSSTTQND------KVLKTREVLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSP
pt042964_POPTR_ YKNTANYGSNSYDHGCGRVLKAREQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSTSS
                 :* :.  .*.      :***:** ****************************** *.*.

AT1G68840.1     AVTKGVLINFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTFERSTGL
pt042964_POPTR_ CSTKGVLLNLEDMSGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKSLKAGDIVCFQRSTGP
                . *****:*:**:.******************************.*:***:* *:**** 

AT1G68840.1     ERQLYIDWKVRSGPRE-NPVQVV--VRLFGVDIFNVTTVKPNDVVAVCGGKRSRDVDDMF
pt042964_POPTR_ DKQLYIDWKARSGSNQVQPVQPIQMVRLFGVNIFNVPGMENG-----CNGKRSVREMELL
                ::*******.***..: :*** :  ******:****. :: .     *.****    :::

AT1G68840.1     AL--RCSKKQAIINAL
pt042964_POPTR_ SLDHQYSKKQRIIGAL
                :*  : **** **.**
BoxShade v3.31 C (beta, 970507) Output
AT1G68840.1     M D S S C I D E - I S S S T S E S F S A T - T A K K L S P P P A A A L R - - - - - L Y R M G S G G S S V V L D P E N G L
pt042964_POPTR_    M D G S C V D E S T T S S T D N S I S I T P T S L T P S P P P A T T T K S P P E S L C R V G S - G N S V I L D L E L G V
 
AT1G68840.1     E T E S R K L P S S K Y K G V V P Q P N G R W G A Q I Y E K H Q R V W L G T F N E Q E E A A R S Y D I A A C R F R G R D
pt042964_POPTR_    E A E S R K L P S S K Y K G V V P Q P N G R W G A Q I Y E K H Q R V W L G T F N E E D E A A R A Y D T A A Q R F R G R D
 
AT1G68840.1     A V V N F K N V L E D G D - - - - L A F L E A H S K A E I V D M L R K H T Y A D E L E Q N N K R Q L F L S V D A N G K -
pt042964_POPTR_    A V T N F K Q V N E T E D D E I E A A F L I T H S K A E I V D M L R K H T Y S D E L E Q - S K R N Q R S N N G V N G K Q
 
AT1G68840.1     - R N G S S T T Q N D - - - - - - K V L K T R E V L F E K A V T P S D V G K L N R L V I P K Q H A E K H F P L P S P S P
pt042964_POPTR_    Y K N T A N Y G S N S Y D H G C G R V L K A R E Q L F E K A V T P S D V G K L N R L V I P K Q H A E K H F P L Q S T S S
 
AT1G68840.1     A V T K G V L I N F E D V N G K V W R F R Y S Y W N S S Q S Y V L T K G W S R F V K E K N L R A G D V V T F E R S T G L
pt042964_POPTR_    C S T K G V L L N L E D M S G K V W R F R Y S Y W N S S Q S Y V L T K G W S R F V K E K S L K A G D I V C F Q R S T G P
 
AT1G68840.1     E R Q L Y I D W K V R S G P R E - N P V Q V V - - V R L F G V D I F N V T T V K P N D V V A V C G G K R S R D V D D M F
pt042964_POPTR_    D K Q L Y I D W K A R S G S N Q V Q P V Q P I Q M V R L F G V N I F N V P G M E N G - - - - - C N G K R S V R E M E L L
 
AT1G68840.1     A L - - R C S K K Q A I I N A L
pt042964_POPTR_    S L D H Q Y S K K Q R I I G A L
 
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