fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G68840.1 VQVVVRLFGVDIFNV at 304/352 in AT1G68840.1
VQVVVRLFGVDIFNV at 304/352 in AT1G68840.2
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt035978 PVQMVRLFGVNIFNV in 357/401 AT1G25560.1 1st_not 0.638759689 II
Pt042964 PIQMVRLFGVNIFNV in 325/369 AT1G25560.1 not_not 0.626356589 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G68840.1     ----------------------------------MDSSCIDEISSSTSESFSATTAKKLS
pt035978_POPTR_ MPLSLVNKNTSSISLSFSFSLAPPSFTTTTRKKNMDGSCIDESTTSSADNSISITPTSLP
pt042964_POPTR_ ----------------------------------MDGSCVDESTTSSTDNSISITPTSLT
                                                  **.**:** ::*:::.  : *...*.

AT1G68840.1     P-PPAAAL------RLYRMGSGGSSVVLDPENGLETESRKLPSSKYKGVVPQPNGRWGAQ
pt035978_POPTR_ PFPPTATTTKSPPESLCRVRSGNSSVILDSESGVEAESRKLPSSKYKGVVPQPNGRWGAQ
pt042964_POPTR_ PSPPPATTTKSPPESLCRVGSGN-SVILDLELGVEAESRKLPSSKYKGVVPQPNGRWGAQ
                * **.*:        * *: **. **:** * *:*:************************

AT1G68840.1     IYEKHQRVWLGTFNEQEEAARSYDIAACRFRGRDAVVNFKNVLEDGD----LAFLEAHSK
pt035978_POPTR_ IYEKHQRVWLGTFNEENEAARAYDIAAQRFRGRDAVTNFKQVNETEDDEIEAAFLNAHSK
pt042964_POPTR_ IYEKHQRVWLGTFNEEDEAARAYDTAAQRFRGRDAVTNFKQVNETEDDEIEAAFLITHSK
                ***************::****:** ** ********.***:* *  *     *** :***

AT1G68840.1     AEIVDMLRKHTYADELEQNNKRQLFLSVDANGK--RNGSSTTQND------KVLKTREVL
pt035978_POPTR_ AEIVDMLRKHTYSDELEQ-SKRNHRSNNGGNGKQYKNTANYENNSYDHGCGRVLKAREQL
pt042964_POPTR_ AEIVDMLRKHTYSDELEQ-SKRNQRSNNGVNGKQYKNTANYGSNSYDHGCGRVLKAREQL
                ************:***** .**:   . . ***  :* :.  .*.      :***:** *

AT1G68840.1     FEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGVLINFEDVNGKVWRFRYSYWN
pt035978_POPTR_ FEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSTSSNSTKGVLLNLEDVSGKVWRFRYSYWN
pt042964_POPTR_ FEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSTSSCSTKGVLLNLEDMSGKVWRFRYSYWN
                ***************************** *.*.  *****:*:**:.************

AT1G68840.1     SSQSYVLTKGWSRFVKEKNLRAGDVVTFERSTGLERQLYIDWKVRSGPRE-NPVQ--VVV
pt035978_POPTR_ SSQSYVLTKGWSRFVKEKNLKAGDIVCFQRSTGPDNQLYIDWKARCGSNQVQPV---QMV
pt042964_POPTR_ SSQSYVLTKGWSRFVKEKSLKAGDIVCFQRSTGPDKQLYIDWKARSGSNQVQPVQPIQMV
                ******************.*:***:* *:**** :.*******.*.*..: :**    :*

AT1G68840.1     RLFGVDIFNVTTVKPNDVVAVCGGKRSRDVDDMFAL----RCSKKQAIINAL
pt035978_POPTR_ RLFGVNIFNVPGMENG-----CDGKRS--IRDMELLSIDRQYSKKQRIVGAL
pt042964_POPTR_ RLFGVNIFNVPGMENG-----CNGKRS--VREMELLSLDHQYSKKQRIIGAL
                *****:****. :: .     *.****  : :*  *    : **** *:.**
BoxShade v3.31 C (beta, 970507) Output
AT1G68840.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M D S S C I D E I S S S T S E S F S A T T A K K L S
pt035978_POPTR_    M P L S L V N K N T S S I S L S F S F S L A P P S F T T T T R K K N M D G S C I D E S T T S S A D N S I S I T P T S L P
pt042964_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M D G S C V D E S T T S S T D N S I S I T P T S L T
 
AT1G68840.1     P - P P A A A L - - - - - - R L Y R M G S G G S S V V L D P E N G L E T E S R K L P S S K Y K G V V P Q P N G R W G A Q
pt035978_POPTR_    P F P P T A T T T K S P P E S L C R V R S G N S S V I L D S E S G V E A E S R K L P S S K Y K G V V P Q P N G R W G A Q
pt042964_POPTR_    P S P P P A T T T K S P P E S L C R V G S G N - S V I L D L E L G V E A E S R K L P S S K Y K G V V P Q P N G R W G A Q
 
AT1G68840.1     I Y E K H Q R V W L G T F N E Q E E A A R S Y D I A A C R F R G R D A V V N F K N V L E D G D - - - - L A F L E A H S K
pt035978_POPTR_    I Y E K H Q R V W L G T F N E E N E A A R A Y D I A A Q R F R G R D A V T N F K Q V N E T E D D E I E A A F L N A H S K
pt042964_POPTR_    I Y E K H Q R V W L G T F N E E D E A A R A Y D T A A Q R F R G R D A V T N F K Q V N E T E D D E I E A A F L I T H S K
 
AT1G68840.1     A E I V D M L R K H T Y A D E L E Q N N K R Q L F L S V D A N G K - - R N G S S T T Q N D - - - - - - K V L K T R E V L
pt035978_POPTR_    A E I V D M L R K H T Y S D E L E Q - S K R N H R S N N G G N G K Q Y K N T A N Y E N N S Y D H G C G R V L K A R E Q L
pt042964_POPTR_    A E I V D M L R K H T Y S D E L E Q - S K R N Q R S N N G V N G K Q Y K N T A N Y G S N S Y D H G C G R V L K A R E Q L
 
AT1G68840.1     F E K A V T P S D V G K L N R L V I P K Q H A E K H F P L P S P S P A V T K G V L I N F E D V N G K V W R F R Y S Y W N
pt035978_POPTR_    F E K A V T P S D V G K L N R L V I P K Q H A E K H F P L Q S T S S N S T K G V L L N L E D V S G K V W R F R Y S Y W N
pt042964_POPTR_    F E K A V T P S D V G K L N R L V I P K Q H A E K H F P L Q S T S S C S T K G V L L N L E D M S G K V W R F R Y S Y W N
 
AT1G68840.1     S S Q S Y V L T K G W S R F V K E K N L R A G D V V T F E R S T G L E R Q L Y I D W K V R S G P R E - N P V Q - - V V V
pt035978_POPTR_    S S Q S Y V L T K G W S R F V K E K N L K A G D I V C F Q R S T G P D N Q L Y I D W K A R C G S N Q V Q P V - - - Q M V
pt042964_POPTR_    S S Q S Y V L T K G W S R F V K E K S L K A G D I V C F Q R S T G P D K Q L Y I D W K A R S G S N Q V Q P V Q P I Q M V
 
AT1G68840.1     R L F G V D I F N V T T V K P N D V V A V C G G K R S R D V D D M F A L - - - - R C S K K Q A I I N A L
pt035978_POPTR_    R L F G V N I F N V P G M E N G - - - - - C D G K R S - - I R D M E L L S I D R Q Y S K K Q R I V G A L
pt042964_POPTR_    R L F G V N I F N V P G M E N G - - - - - C N G K R S - - V R E M E L L S L D H Q Y S K K Q R I I G A L
 
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