fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G68840.1 VQVVVRLFGVDIFNV at 304/352 in AT1G68840.1
VQVVVRLFGVDIFNV at 304/352 in AT1G68840.2
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os003376 PVKAVRLFGVDLLTA in 347/393 AT1G68840.1 1st_1st 0.486821705 Ia
Os000363 ARVVVKLFGVDIAGD in 305/317 AT1G68840.1 not_1st 0.471317829 II
Os000364 EPRVVRLFGVDIAGG in 320/365 AT1G25560.1 not_not 0.463565891 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G68840.1     -------MDSSCIDEISSSTSESFSATT-----------------AKKLSPPPAAALRLY
Os000363_Os01t0 MEQEAAMVVFSC-----NSGSGGSSSTTDSKQEEEEEEELAAMEEDELIHVVQAAELRLP
Os000364_Os01t0 ----MGVVSFSS-----TS-SGASTATTESGG--------AVRMSPEPVVAVAAAAQQLP
Os003376_Os01t0 ------MDSSSCL--VDDTNSGGSST-------------------DKLRALAAAAAETAP
                          *.      : * . ::                    :      **     

AT1G68840.1     --RMGSGGSSVVLDPENGLETES------------------RKLPSSKYKGVVPQPNGRW
Os000363_Os01t0 ---------SSTTATRP----------------------------SSRYKGVVPQPNGRW
Os000364_Os01t0 VVK-GVDSADEVVTSRPAAAAAQ---------------------QSSRYKGVVPQPNGRW
Os003376_Os01t0 LERMGSGASAVVDAAEPGAEADSGSGGRVCGGGGGGAGGAGGKLPSSKFKGVVPQPNGRW
                           .  ..                             **::***********

AT1G68840.1     GAQIYEKHQRVWLGTFNEQEEAARSYDIAACRFRGRDAVVNFKNVLE-----DGDLAFLE
Os000363_Os01t0 GAQIYERHARVWLGTFPDEEAAARAYDVAALRFRGRDAVTNRAPAAE--GASAGELAFLA
Os000364_Os01t0 GAQIYERHARVWLGTFPDEEAAARAYDVAALRYRGRDAATNFPGAA----ASAAELAFLA
Os003376_Os01t0 GAQIYERHQRVWLGTFAGEDDAARAYDVAAQRFRGRDAVTNFRPLAEADPDAAAELRFLA
                ******:* *******  :: ***:**:** *:*****..*            .:* ** 

AT1G68840.1     AHSKAEIVDMLRKHTYADELEQNNKR--------QLFLSVDANGKRNGSSTTQNDKVLKT
Os000363_Os01t0 AHSKAEVVDMLRKHTYDDELQQGLRR---------------------GSRAQPTPRW--A
Os000364_Os01t0 AHSKAEIVDMLRKHTYADELRQGLRR-----------------GRGMGARAQPTPSW--A
Os003376_Os01t0 TRSKAEVVDMLRKHTYFDELAQSKRTFAASTPSAATTTASLSNGHLSSPRSPFAPAA--A
                ::****:********* *** *. :                      .. :        :

AT1G68840.1     REVLFEKAVTPSDVGKLNRLVIPKQHAEKH--FPL---PSPSPA----VTKGVLINFEDV
Os000363_Os01t0 REPLFEKAVTPSDVGKLNRLVVPKQQAERHFPFPLRR-HSSDAA-----GKGVLLNFEDG
Os000364_Os01t0 REPLFEKAVTPSDVGKLNRLVVPKQHAEKH--FPLRRAASSDSASAAATGKGVLLNFEDG
Os003376_Os01t0 RDHLFDKTVTPSDVGKLNRLVIPKQHAEKH--FPLQL-PSAGGE-----SKGVLLNFEDA
                *: **:*:*************:***:**:*  ***    *..        ****:**** 

AT1G68840.1     NGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTFERS---TGLERQLYIDWKV
Os000363_Os01t0 DGKVWRFRYSYWNSSQSYVLTKGWSRFVREKGLRPGDTVAFSRSAAAWGTEKHLLIDCKK
Os000364_Os01t0 EGKVWRFRYSYWNSSQSYVLTKGWSRFVREKGLRAGDTIVFSRS--AYGPDKLLFIDCKK
Os003376_Os01t0 AGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDVVGFYRSAASAGDDGKLFIDCKL
                 ***************************:**.*:.**.: * **    * :  * ** * 

AT1G68840.1     -----------RSGPRENPVQV-----VVRLFGVDIFNVTTVKPNDVVAVCGGK-RSRDV
Os000363_Os01t0 MERNNLA----TVDDDARV--------VVKLFGVDI--------------AGDKTR----
Os000364_Os01t0 ---NNAAAATTTCAGDERPTTSGAEPRVVRLFGVDI--------------AGGDCRKRER
Os003376_Os01t0 VRSTGAALA--SPADQPAP----SPVKAVRLFGVDLLTA----PAPVEQMAGCK-RARDL
                                           .*:*****:              .* . *    

AT1G68840.1     -----DDMFALRCSKKQAIIN-------AL---
Os000363_Os01t0 ---------------------------------
Os000364_Os01t0 AVEMGQEVFLL---KRQCVVHQRTPALGALLL-
Os003376_Os01t0 AATTPPQAAAF---KKQCI---------ELALV
BoxShade v3.31 C (beta, 970507) Output
AT1G68840.1     - - - - - - - M D S S C I D E I S S S T S E S F S A T T - - - - - - - - - - - - - - - - - A K K L S P P P A A A L R L Y
Os000363_Os01t0    M E Q E A A M V V F S C - - - - - N S G S G G S S S T T D S K Q E E E E E E E L A A M E E D E L I H V V Q A A E L R L P
Os000364_Os01t0    - - - - M G V V S F S S - - - - - T S - S G A S T A T T E S G G - - - - - - - - A V R M S P E P V V A V A A A A Q Q L P
Os003376_Os01t0    - - - - - - M D S S S C L - - V D D T N S G G S S T - - - - - - - - - - - - - - - - - - - D K L R A L A A A A A E T A P
 
AT1G68840.1     - - R M G S G G S S V V L D P E N G L E T E S - - - - - - - - - - - - - - - - - - R K L P S S K Y K G V V P Q P N G R W
Os000363_Os01t0    - - - - - - - - - S S T T A T R P - - - - - - - - - - - - - - - - - - - - - - - - - - - - S S R Y K G V V P Q P N G R W
Os000364_Os01t0    V V K - G V D S A D E V V T S R P A A A A A Q - - - - - - - - - - - - - - - - - - - - - Q S S R Y K G V V P Q P N G R W
Os003376_Os01t0    L E R M G S G A S A V V D A A E P G A E A D S G S G G R V C G G G G G G A G G A G G K L P S S K F K G V V P Q P N G R W
 
AT1G68840.1     G A Q I Y E K H Q R V W L G T F N E Q E E A A R S Y D I A A C R F R G R D A V V N F K N V L E - - - - - D G D L A F L E
Os000363_Os01t0    G A Q I Y E R H A R V W L G T F P D E E A A A R A Y D V A A L R F R G R D A V T N R A P A A E - - G A S A G E L A F L A
Os000364_Os01t0    G A Q I Y E R H A R V W L G T F P D E E A A A R A Y D V A A L R Y R G R D A A T N F P G A A - - - - A S A A E L A F L A
Os003376_Os01t0    G A Q I Y E R H Q R V W L G T F A G E D D A A R A Y D V A A Q R F R G R D A V T N F R P L A E A D P D A A A E L R F L A
 
AT1G68840.1     A H S K A E I V D M L R K H T Y A D E L E Q N N K R - - - - - - - - Q L F L S V D A N G K R N G S S T T Q N D K V L K T
Os000363_Os01t0    A H S K A E V V D M L R K H T Y D D E L Q Q G L R R - - - - - - - - - - - - - - - - - - - - - G S R A Q P T P R W - - A
Os000364_Os01t0    A H S K A E I V D M L R K H T Y A D E L R Q G L R R - - - - - - - - - - - - - - - - - G R G M G A R A Q P T P S W - - A
Os003376_Os01t0    T R S K A E V V D M L R K H T Y F D E L A Q S K R T F A A S T P S A A T T T A S L S N G H L S S P R S P F A P A A - - A
 
AT1G68840.1     R E V L F E K A V T P S D V G K L N R L V I P K Q H A E K H - - F P L - - - P S P S P A - - - - V T K G V L I N F E D V
Os000363_Os01t0    R E P L F E K A V T P S D V G K L N R L V V P K Q Q A E R H F P F P L R R - H S S D A A - - - - - G K G V L L N F E D G
Os000364_Os01t0    R E P L F E K A V T P S D V G K L N R L V V P K Q H A E K H - - F P L R R A A S S D S A S A A A T G K G V L L N F E D G
Os003376_Os01t0    R D H L F D K T V T P S D V G K L N R L V I P K Q H A E K H - - F P L Q L - P S A G G E - - - - - S K G V L L N F E D A
 
AT1G68840.1     N G K V W R F R Y S Y W N S S Q S Y V L T K G W S R F V K E K N L R A G D V V T F E R S - - - T G L E R Q L Y I D W K V
Os000363_Os01t0    D G K V W R F R Y S Y W N S S Q S Y V L T K G W S R F V R E K G L R P G D T V A F S R S A A A W G T E K H L L I D C K K
Os000364_Os01t0    E G K V W R F R Y S Y W N S S Q S Y V L T K G W S R F V R E K G L R A G D T I V F S R S - - A Y G P D K L L F I D C K K
Os003376_Os01t0    A G K V W R F R Y S Y W N S S Q S Y V L T K G W S R F V K E K G L H A G D V V G F Y R S A A S A G D D G K L F I D C K L
 
AT1G68840.1     - - - - - - - - - - - R S G P R E N P V Q V - - - - - V V R L F G V D I F N V T T V K P N D V V A V C G G K - R S R D V
Os000363_Os01t0    M E R N N L A - - - - T V D D D A R V - - - - - - - - V V K L F G V D I - - - - - - - - - - - - - - A G D K T R - - - -
Os000364_Os01t0    - - - N N A A A A T T T C A G D E R P T T S G A E P R V V R L F G V D I - - - - - - - - - - - - - - A G G D C R K R E R
Os003376_Os01t0    V R S T G A A L A - - S P A D Q P A P - - - - S P V K A V R L F G V D L L T A - - - - P A P V E Q M A G C K - R A R D L
 
AT1G68840.1     - - - - - D D M F A L R C S K K Q A I I N - - - - - - - A L - - -
Os000363_Os01t0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Os000364_Os01t0    A V E M G Q E V F L L - - - K R Q C V V H Q R T P A L G A L L L -
Os003376_Os01t0    A A T T P P Q A A A F - - - K K Q C I - - - - - - - - - E L A L V
 
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