fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G68840.1 VQVVVRLFGVDIFNV at 304/352 in AT1G68840.1
VQVVVRLFGVDIFNV at 304/352 in AT1G68840.2
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb032995 PVKAVRLFGVDLLTT in 374/428 AT1G25560.1 1st_not 0.497674418 II
Sb024795 EARVVRLFGVDIAGD in 418/557 AT1G68840.1 not_1st 0.455813953 II
Get sequence file
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G68840.1     ------------------------------------------------MDS-SC-IDEIS
Sb024795_Sorbi1 RRILSITGRRAAAGSRVPKQKSKKPKAARLQGAARAVALAHLIMGIESMSPTAAPAEDSS
Sb032995_Sorbi1 ----------------PPLLELNLPQSISLSRGGCS----------DRMDSTSCLLDDAS
                                                                *.. :.  :: *

AT1G68840.1     SSTSESFS----ATTAKKLSPPPAAAL---RLYRMGSGGSSVVLDPENGLETES------
Sb024795_Sorbi1 SSSS-RFSAASTATTESGAAQPRAASA--------APGGGAVVVGRDASLADEQAVTSQP
Sb032995_Sorbi1 SGAS---------TGNKNPAPAPAAATGGKPLQRVGSGASAVMDAAEPGAEADSG-SGGA
                *.:*         *  .  : . **:         ..*..:*:   : .   :.      

AT1G68840.1     -------------RKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEQEEAARSYDI
Sb024795_Sorbi1 LAASTAAAVAQG-----SSRFKGVVPQPNGRWGAQIYERHARVWLGTFADEEAAARAYDV
Sb032995_Sorbi1 GRATGGCGVVSGNGKLPSSKYKGVVPQPNGRWGAQIYERHQRVWLGTFTGEAEAARAYDV
                                 **::*****************:* *******  :  ***:**:

AT1G68840.1     AACRFRGRDAVVNFKNVLEDG-----DLAFLEAHSKAEIVDMLRKHTYADELEQNNKRQL
Sb024795_Sorbi1 AALRYRGREAATNFPGAGASAP----ELTFLAAHSKAEIVDMLRKHTYADELRQG-----
Sb032995_Sorbi1 AAQRFRGRDAVTNFRPLAESDPEAAVELRFLASRTKAEVVDMLRKHTYGEELAQN--RRA
                ** *:***:*..**     .      :* ** :::***:*********.:** *.     

AT1G68840.1     FLSVDANG------KRNGSSTTQNDKVLKTREVLFEKAVTPSDVGKLNRLVIPKQHAEKH
Sb024795_Sorbi1 ------------LRRGRGMGARAQPTPAWARSLLFEKAVTPSDVGKLNRLVVPKQHAEKH
Sb032995_Sorbi1 FAAASPAASPPPAKNNNPAASSSSPTAVTAREHLFDKTVTPSDVGKLNRLVIPKQHAEKH
                              . .  .:  . .   :*. **:*:*************:********

AT1G68840.1     FPL---PSPSPAVT------KGVLINFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKE
Sb024795_Sorbi1 FPLKRAPEASAAAATTG---KGVLLNFEDGEGKVWRFRYSYWNSSQSYVLTKGWSRFVRE
Sb032995_Sorbi1 FPL---QLPAAAAAVVGGECKGVLLNFEDATGKVWRFRYSYWNSSQSYVLTKGWSRFVKE
                ***     .:.*.:      ****:****  ***************************:*

AT1G68840.1     KNLRAGDVVTFERST-GLERQLYIDWKVR-----------------SGPRENPVQV----
Sb024795_Sorbi1 KGLRAGDTIVFSHSTYSSEKQLFIDCKKT-KTTTVA-------TTDGAPVPAPAEKKPSE
Sb032995_Sorbi1 KGLHAGDAVGFYRSA-GGKQQFFIDCKLRPKTTTTAASFVNATTTTAAP--SPVK-----
                *.*:***.: * :*: . ::*::** *                   ..*   *.:     

AT1G68840.1     --VVRLFGVDIFNVTTVKPNDVVAVC--------GG----KRSRDVDDMFALRCSKKQAI
Sb024795_Sorbi1 ARVVRLFGVDI-----------------------AGDGCQKRARPVE--IAFEHGPQQEL
Sb032995_Sorbi1 --AVRLFGVDL--LTTPRPGPAVVAAPEQEEIAMAN----KRARD-------------AI
                  .*******:                       ..    **:*               :

AT1G68840.1     INAL------------------
Sb024795_Sorbi1 LKKKQCVGVAHHRSPALGAFLL
Sb032995_Sorbi1 ARVLQYTWFS--RSNAYTSR--
                 .
BoxShade v3.31 C (beta, 970507) Output
AT1G68840.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M D S - S C - I D E I S
Sb024795_Sorbi1    R R I L S I T G R R A A A G S R V P K Q K S K K P K A A R L Q G A A R A V A L A H L I M G I E S M S P T A A P A E D S S
Sb032995_Sorbi1    - - - - - - - - - - - - - - - - P P L L E L N L P Q S I S L S R G G C S - - - - - - - - - - D R M D S T S C L L D D A S
 
AT1G68840.1     S S T S E S F S - - - - A T T A K K L S P P P A A A L - - - R L Y R M G S G G S S V V L D P E N G L E T E S - - - - - -
Sb024795_Sorbi1    S S S S - R F S A A S T A T T E S G A A Q P R A A S A - - - - - - - - A P G G G A V V V G R D A S L A D E Q A V T S Q P
Sb032995_Sorbi1    S G A S - - - - - - - - - T G N K N P A P A P A A A T G G K P L Q R V G S G A S A V M D A A E P G A E A D S G - S G G A
 
AT1G68840.1     - - - - - - - - - - - - - R K L P S S K Y K G V V P Q P N G R W G A Q I Y E K H Q R V W L G T F N E Q E E A A R S Y D I
Sb024795_Sorbi1    L A A S T A A A V A Q G - - - - - S S R F K G V V P Q P N G R W G A Q I Y E R H A R V W L G T F A D E E A A A R A Y D V
Sb032995_Sorbi1    G R A T G G C G V V S G N G K L P S S K Y K G V V P Q P N G R W G A Q I Y E R H Q R V W L G T F T G E A E A A R A Y D V
 
AT1G68840.1     A A C R F R G R D A V V N F K N V L E D G - - - - - D L A F L E A H S K A E I V D M L R K H T Y A D E L E Q N N K R Q L
Sb024795_Sorbi1    A A L R Y R G R E A A T N F P G A G A S A P - - - - E L T F L A A H S K A E I V D M L R K H T Y A D E L R Q G - - - - -
Sb032995_Sorbi1    A A Q R F R G R D A V T N F R P L A E S D P E A A V E L R F L A S R T K A E V V D M L R K H T Y G E E L A Q N - - R R A
 
AT1G68840.1     F L S V D A N G - - - - - - K R N G S S T T Q N D K V L K T R E V L F E K A V T P S D V G K L N R L V I P K Q H A E K H
Sb024795_Sorbi1    - - - - - - - - - - - - L R R G R G M G A R A Q P T P A W A R S L L F E K A V T P S D V G K L N R L V V P K Q H A E K H
Sb032995_Sorbi1    F A A A S P A A S P P P A K N N N P A A S S S S P T A V T A R E H L F D K T V T P S D V G K L N R L V I P K Q H A E K H
 
AT1G68840.1     F P L - - - P S P S P A V T - - - - - - K G V L I N F E D V N G K V W R F R Y S Y W N S S Q S Y V L T K G W S R F V K E
Sb024795_Sorbi1    F P L K R A P E A S A A A A T T G - - - K G V L L N F E D G E G K V W R F R Y S Y W N S S Q S Y V L T K G W S R F V R E
Sb032995_Sorbi1    F P L - - - Q L P A A A A A V V G G E C K G V L L N F E D A T G K V W R F R Y S Y W N S S Q S Y V L T K G W S R F V K E
 
AT1G68840.1     K N L R A G D V V T F E R S T - G L E R Q L Y I D W K V R - - - - - - - - - - - - - - - - - S G P R E N P V Q V - - - -
Sb024795_Sorbi1    K G L R A G D T I V F S H S T Y S S E K Q L F I D C K K T - K T T T V A - - - - - - - T T D G A P V P A P A E K K P S E
Sb032995_Sorbi1    K G L H A G D A V G F Y R S A - G G K Q Q F F I D C K L R P K T T T T A A S F V N A T T T T A A P - - S P V K - - - - -
 
AT1G68840.1     - - V V R L F G V D I F N V T T V K P N D V V A V C - - - - - - - - G G - - - - K R S R D V D D M F A L R C S K K Q A I
Sb024795_Sorbi1    A R V V R L F G V D I - - - - - - - - - - - - - - - - - - - - - - - A G D G C Q K R A R P V E - - I A F E H G P Q Q E L
Sb032995_Sorbi1    - - A V R L F G V D L - - L T T P R P G P A V V A A P E Q E E I A M A N - - - - K R A R D - - - - - - - - - - - - - A I
 
AT1G68840.1     I N A L - - - - - - - - - - - - - - - - - -
Sb024795_Sorbi1    L K K K Q C V G V A H H R S P A L G A F L L
Sb032995_Sorbi1    A R V L Q Y T W F S - - R S N A Y T S R - -
 
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