fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G68840.1 VQVVVRLFGVDIFNV at 304/352 in AT1G68840.1
VQVVVRLFGVDIFNV at 304/352 in AT1G68840.2
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb025645 not found in 538aa AT1G25560.1 not_not 0.489922480 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G68840.1     ---------MD--SSCIDEISSSTSESFSATT--------AKKLSPPPAAALRLYRMGSG
Sb025645_Sorbi1 PASSSGALKMDSASSLVDDTSSGSGGGGGASTDKLRALAVAAAASGPP-----LERMGSG
                         **  ** :*: **.:. . .*:*        *   * **     * *****

AT1G68840.1     GSSVVLDPENGLETESR------------KLPSSKYKGVVPQPNGRWGAQIYEKHQRVWL
Sb025645_Sorbi1 ASAVLDAAEPGAEADSAAAAAPGAVGVGGKLPSSRYKGVVPQPNGRWGAQIYERHQRVWL
                .*:*:  .* * *::*             *****:******************:******

AT1G68840.1     GTFNEQEEAARSYDIAACRFRGRDAVVNFKNVLEDGD------LAFLEAHSKAEIVDMLR
Sb025645_Sorbi1 GTFAGEADAARAYDVAAQRFRGRDAVTNFRP-LADADPDAAAELRFLASRSKAEVVDMLR
                ***  : :***:**:** ********.**:  * *.*      * ** ::****:*****

AT1G68840.1     KHTYADELEQNNKRQLFLSVDANGKRNGSSTT--------QNDKVLKT------REVLFE
Sb025645_Sorbi1 KHTYFDELAQN--KRAFAAAAAAAASSAATTTASSLANNNNNHSSLASPSPATAREHLFD
                **** *** **  :: * :. * .  ..::**        :*.. * :      ** **:

AT1G68840.1     KAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSP-AVTKGVLINFEDVNGKVWRFRYSYWNS
Sb025645_Sorbi1 KTVTPSDVGKLNRLVIPKQHAEKHFPLQLPSAGGESKGVLLNLEDAAGKVWRFRYSYWNS
                *:*************************  **. . :****:*:**. *************

AT1G68840.1     SQSYVLTKGWSRFVKEKNLRAGDVVTFERST----GLERQLYIDWKVR------------
Sb025645_Sorbi1 SQSYVLTKGWSRFVKEKGLQAGDVVGFYRSSAVGAGADTKLFIDCKLRPNSVATASTTTG
                *****************.*:***** * **:    * : :*:** *:*            

AT1G68840.1     -----SGPRENPVQV---VVRLFGVDIFN---VTTVKPNDVVAVCGGKRSRDVDD----M
Sb025645_Sorbi1 PAVGSSPPAPAPAPVATKAVRLFGVDLLTAPAATAAAPAEAMAA-GCKRARDLASPPQAA
                     * *   *. *   .*******::.   .*:. * :.:*. * **:**: .     

AT1G68840.1     FALRCSKKQAIINAL-
Sb025645_Sorbi1 F-----KKQLVELALV
                *     *** :  **
BoxShade v3.31 C (beta, 970507) Output
AT1G68840.1     - - - - - - - - - M D - - S S C I D E I S S S T S E S F S A T T - - - - - - - - A K K L S P P P A A A L R L Y R M G S G
Sb025645_Sorbi1    P A S S S G A L K M D S A S S L V D D T S S G S G G G G G A S T D K L R A L A V A A A A S G P P - - - - - L E R M G S G
 
AT1G68840.1     G S S V V L D P E N G L E T E S R - - - - - - - - - - - - K L P S S K Y K G V V P Q P N G R W G A Q I Y E K H Q R V W L
Sb025645_Sorbi1    A S A V L D A A E P G A E A D S A A A A A P G A V G V G G K L P S S R Y K G V V P Q P N G R W G A Q I Y E R H Q R V W L
 
AT1G68840.1     G T F N E Q E E A A R S Y D I A A C R F R G R D A V V N F K N V L E D G D - - - - - - L A F L E A H S K A E I V D M L R
Sb025645_Sorbi1    G T F A G E A D A A R A Y D V A A Q R F R G R D A V T N F R P - L A D A D P D A A A E L R F L A S R S K A E V V D M L R
 
AT1G68840.1     K H T Y A D E L E Q N N K R Q L F L S V D A N G K R N G S S T T - - - - - - - - Q N D K V L K T - - - - - - R E V L F E
Sb025645_Sorbi1    K H T Y F D E L A Q N - - K R A F A A A A A A A A S S A A T T T A S S L A N N N N N H S S L A S P S P A T A R E H L F D
 
AT1G68840.1     K A V T P S D V G K L N R L V I P K Q H A E K H F P L P S P S P - A V T K G V L I N F E D V N G K V W R F R Y S Y W N S
Sb025645_Sorbi1    K T V T P S D V G K L N R L V I P K Q H A E K H F P L Q L P S A G G E S K G V L L N L E D A A G K V W R F R Y S Y W N S
 
AT1G68840.1     S Q S Y V L T K G W S R F V K E K N L R A G D V V T F E R S T - - - - G L E R Q L Y I D W K V R - - - - - - - - - - - -
Sb025645_Sorbi1    S Q S Y V L T K G W S R F V K E K G L Q A G D V V G F Y R S S A V G A G A D T K L F I D C K L R P N S V A T A S T T T G
 
AT1G68840.1     - - - - - S G P R E N P V Q V - - - V V R L F G V D I F N - - - V T T V K P N D V V A V C G G K R S R D V D D - - - - M
Sb025645_Sorbi1    P A V G S S P P A P A P A P V A T K A V R L F G V D L L T A P A A T A A A P A E A M A A - G C K R A R D L A S P P Q A A
 
AT1G68840.1     F A L R C S K K Q A I I N A L -
Sb025645_Sorbi1    F - - - - - K K Q L V E L A L V
 
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