fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G68840.1 VQVVVRLFGVDIFNV at 304/352 in AT1G68840.1
VQVVVRLFGVDIFNV at 304/352 in AT1G68840.2
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm001006 PIQMVRLFGVNILKL in 335/384 AT1G25560.1 1st_not 0.606201550 II
Gm003570 PIQMVRLFGVNILKL in 351/401 AT1G68840.1 not_1st 0.6 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G68840.1     MDS-SCIDEISSSTSESFSAT--------TAK-----------KLSPPPAAALRLYRMGS
gm001006_Glyma0 MDAISCLDE--STTTESLSIS--------QAKPSSTIMSSEKASPSPPPPN--RLCRVGS
gm003570_Glyma0 MDAISCMDE--STTTESLSISLSPTSSSEKAKPSSMITSSEKVSLSPPPSN--RLCRVGS
                **: **:**  *:*:**:* :         **           . ****.   ** *:**

AT1G68840.1     GGSSVVLDPENG-----LETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEQ
gm001006_Glyma0 GASAVV-DSDGGGGGGSTEVESRKLPSSKYKGVVPQPNGRWGSQIYEKHQRVWLGTFNEE
gm003570_Glyma0 GASAVV-DPDGGGSGA--EVESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEE
                *.*:** *.:.*      *.**********************:****************:

AT1G68840.1     EEAARSYDIAACRFRGRDAVVNFKNVL----EDGDLAFLEAHSKAEIVDMLRKHTYADEL
gm001006_Glyma0 DEAARAYDVAVQRFRGKDAVTNFKPLSGTDDDDGESEFLNSHSKSEIVDMLRKHTYNDEL
gm003570_Glyma0 DEAARAYDIAAQRFRGKDAVTNFKPLAGADDDDGESEFLNSHSKPEIVDMLRKHTYNDEL
                :****:**:*. ****:***.*** :     :**:  **::***.*********** ***

AT1G68840.1     EQNNKRQLFLSVDANGKRNGSST---TQNDK----VLKTREVLFEKAVTPSDVGKLNRLV
gm001006_Glyma0 EQSKRSRGFV------RRRGSAAGAGNGNSISGACVMKAREQLFQKAVTPSDVGKLNRLV
gm003570_Glyma0 EQSKRSRGVV------RRRGSAA-AGTANSISGACFTKAREQLFEKAVTPSDVGKLNRLV
                **.:: : .:      :*.**::   . *.     . *:** **:***************

AT1G68840.1     IPKQHAEKHFPLPS--------------PSPAVTKGVLINFEDVNGKVWRFRYSYWNSSQ
gm001006_Glyma0 IPKQHAEKHFPLQSAANGVSATA--------TAAKGVLLNFEDVGGKVWRFRYSYWNSSQ
gm003570_Glyma0 IPKQHAEKHFPLQS-SNGVSATTIAAVTATPTAAKGVLLNFEDVGGKVWRFRYSYWNSSQ
                ************ *                 :.:****:*****.***************

AT1G68840.1     SYVLTKGWSRFVKEKNLRAGDVVTFERSTGLERQLYIDWKVRS------------GPREN
gm001006_Glyma0 SYVLTKGWSRFVKEKNLKAGDTVCFQRSTGPDRQLYIDWKTRNVV-NEVALF---GPVVE
gm003570_Glyma0 SYVLTKGWSRFVKEKNLKAGDTVCFHRSTGPDKQLYIDWKTRNVVNNEVALFGPVGPVVE
                *****************:***.* *.**** ::*******.*.            **  :

AT1G68840.1     PVQVVVRLFGVDIFNVTT-----VKPNDVVAVCGGKRSRDVDDMFALRCSKKQAIINAL
gm001006_Glyma0 PIQ-MVRLFGVNILKLPGSDSI-ANNNNASGCCNGKR-REM-ELFSLECSKKPKIIGAL
gm003570_Glyma0 PIQ-MVRLFGVNILKLPGSDTIVGNNNNASGCCNGKR-REM-ELFSLECSKKPKIIGAL
                *:* :******:*:::.       : *:. . *.*** *:: ::*:*.****  **.**
BoxShade v3.31 C (beta, 970507) Output
AT1G68840.1     M D S - S C I D E I S S S T S E S F S A T - - - - - - - - T A K - - - - - - - - - - - K L S P P P A A A L R L Y R M G S
gm001006_Glyma0    M D A I S C L D E - - S T T T E S L S I S - - - - - - - - Q A K P S S T I M S S E K A S P S P P P P N - - R L C R V G S
gm003570_Glyma0    M D A I S C M D E - - S T T T E S L S I S L S P T S S S E K A K P S S M I T S S E K V S L S P P P S N - - R L C R V G S
 
AT1G68840.1     G G S S V V L D P E N G - - - - - L E T E S R K L P S S K Y K G V V P Q P N G R W G A Q I Y E K H Q R V W L G T F N E Q
gm001006_Glyma0    G A S A V V - D S D G G G G G G S T E V E S R K L P S S K Y K G V V P Q P N G R W G S Q I Y E K H Q R V W L G T F N E E
gm003570_Glyma0    G A S A V V - D P D G G G S G A - - E V E S R K L P S S K Y K G V V P Q P N G R W G A Q I Y E K H Q R V W L G T F N E E
 
AT1G68840.1     E E A A R S Y D I A A C R F R G R D A V V N F K N V L - - - - E D G D L A F L E A H S K A E I V D M L R K H T Y A D E L
gm001006_Glyma0    D E A A R A Y D V A V Q R F R G K D A V T N F K P L S G T D D D D G E S E F L N S H S K S E I V D M L R K H T Y N D E L
gm003570_Glyma0    D E A A R A Y D I A A Q R F R G K D A V T N F K P L A G A D D D D G E S E F L N S H S K P E I V D M L R K H T Y N D E L
 
AT1G68840.1     E Q N N K R Q L F L S V D A N G K R N G S S T - - - T Q N D K - - - - V L K T R E V L F E K A V T P S D V G K L N R L V
gm001006_Glyma0    E Q S K R S R G F V - - - - - - R R R G S A A G A G N G N S I S G A C V M K A R E Q L F Q K A V T P S D V G K L N R L V
gm003570_Glyma0    E Q S K R S R G V V - - - - - - R R R G S A A - A G T A N S I S G A C F T K A R E Q L F E K A V T P S D V G K L N R L V
 
AT1G68840.1     I P K Q H A E K H F P L P S - - - - - - - - - - - - - - P S P A V T K G V L I N F E D V N G K V W R F R Y S Y W N S S Q
gm001006_Glyma0    I P K Q H A E K H F P L Q S A A N G V S A T A - - - - - - - - T A A K G V L L N F E D V G G K V W R F R Y S Y W N S S Q
gm003570_Glyma0    I P K Q H A E K H F P L Q S - S N G V S A T T I A A V T A T P T A A K G V L L N F E D V G G K V W R F R Y S Y W N S S Q
 
AT1G68840.1     S Y V L T K G W S R F V K E K N L R A G D V V T F E R S T G L E R Q L Y I D W K V R S - - - - - - - - - - - - G P R E N
gm001006_Glyma0    S Y V L T K G W S R F V K E K N L K A G D T V C F Q R S T G P D R Q L Y I D W K T R N V V - N E V A L F - - - G P V V E
gm003570_Glyma0    S Y V L T K G W S R F V K E K N L K A G D T V C F H R S T G P D K Q L Y I D W K T R N V V N N E V A L F G P V G P V V E
 
AT1G68840.1     P V Q V V V R L F G V D I F N V T T - - - - - V K P N D V V A V C G G K R S R D V D D M F A L R C S K K Q A I I N A L
gm001006_Glyma0    P I Q - M V R L F G V N I L K L P G S D S I - A N N N N A S G C C N G K R - R E M - E L F S L E C S K K P K I I G A L
gm003570_Glyma0    P I Q - M V R L F G V N I L K L P G S D T I V G N N N N A S G C C N G K R - R E M - E L F S L E C S K K P K I I G A L
 
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