fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G69120.1 AMRRNDLELTLEPVYN at 237/256 in AT1G69120.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm044291 EVGRNELDLTLEPLYS in 220/236 AT1G69120.1 1st_1st 0.730688935 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G69120.1     MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD
gm044291_Glyma1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYATD
                *********************************************:***********:**

AT1G69120.1     SCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAM
gm044291_Glyma1 SCMEKILERYERYAYAERQLVANDSESQGNWTIEYTRLKAKIDLLQRNHRHYMGEDLGSM
                *************:******:* :*: : **::**.******:**:**:***:**** :*

AT1G69120.1     SPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQIKEREKILR
gm044291_Glyma1 SLKELQSLEQQLDTALKQIRTRRNQLMYESISELQKKEKVIQEQNNMLAKKIKEKEKV-A
                * ****.**********:****:********.*******.*****.**:*:***:**:  

AT1G69120.1     AQQEQWDQQNQGHNMPPPLPPQQHQIQHPYMLSHQPSPFLNMGGLYQEDDPMAMRRNDLE
gm044291_Glyma1 AQQAQWEHPNHGVNA-------------SFLL---PQPLLNMGGNYRE-EASEVGRNELD
                *** **:: *:* *              .::*   *.*:***** *:* :.  : **:*:

AT1G69120.1     LTLEPVYNCNLGCFAA
gm044291_Glyma1 LTLEPLYSCHLGCF--
                *****:*.*:****
BoxShade v3.31 C (beta, 970507) Output
AT1G69120.1     M G R G R V Q L K R I E N K I N R Q V T F S K R R A G L L K K A H E I S V L C D A E V A L V V F S H K G K L F E Y S T D
gm044291_Glyma1    M G R G R V Q L K R I E N K I N R Q V T F S K R R A G L L K K A H E I S V L C D A E V A L I V F S H K G K L F E Y A T D
 
AT1G69120.1     S C M E K I L E R Y E R Y S Y A E R Q L I A P E S D V N T N W S M E Y N R L K A K I E L L E R N Q R H Y L G E D L Q A M
gm044291_Glyma1    S C M E K I L E R Y E R Y A Y A E R Q L V A N D S E S Q G N W T I E Y T R L K A K I D L L Q R N H R H Y M G E D L G S M
 
AT1G69120.1     S P K E L Q N L E Q Q L D T A L K H I R T R K N Q L M Y E S I N E L Q K K E K A I Q E Q N S M L S K Q I K E R E K I L R
gm044291_Glyma1    S L K E L Q S L E Q Q L D T A L K Q I R T R R N Q L M Y E S I S E L Q K K E K V I Q E Q N N M L A K K I K E K E K V - A
 
AT1G69120.1     A Q Q E Q W D Q Q N Q G H N M P P P L P P Q Q H Q I Q H P Y M L S H Q P S P F L N M G G L Y Q E D D P M A M R R N D L E
gm044291_Glyma1    A Q Q A Q W E H P N H G V N A - - - - - - - - - - - - - S F L L - - - P Q P L L N M G G N Y R E - E A S E V G R N E L D
 
AT1G69120.1     L T L E P V Y N C N L G C F A A
gm044291_Glyma1    L T L E P L Y S C H L G C F - -
 
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