fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G69180.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm003789 not found in 160aa AT1G69180.1 not_1st 0.531914893 II
Pt033807 not found in 180aa AT1G69180.1 not_1st 0.528875379 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G69180.1     MNLEEKPTMTASRASPQAEHLYYVRCSICNTILAVGIPLKRMLDTVTVKCGHCGNLSFLT
pt033807_POPTR_ MNLEEKVIDT---DVLSSDHLSYVRCNFCNTVLAVRIPFKRMLDTVTVKCGHCNNLSFLS
gm003789_Glyma0 MNHEDKLTMD---LVPPSEHLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSFLS
                ** *:*           ::** ****.:***:*** ** **:***********.*****:

AT1G69180.1     TTPPLQGH------VSLTLQ------------MQSFGGSDYKKGSSSSSSSS-TSSDQPP
pt033807_POPTR_ TRSPNLGNFLDIDHHHLSLQGVSSNEKLLFKETQGF-CTDFRKGEYSSSS----TSSEPL
gm003789_Glyma0 TRPPS-SQSQSVD-HTLSLQ-------------QGF-YSNAKKGQASSSSSSPTTSNESV
                * .*  .:        *:**             *.*  :: :**. ****    :*.:. 

AT1G69180.1     SPS-PPFVVKPPEKKQRLPSAYNRFMRDEIQRIKSANPEIPHREAFSAAAKNWAKYIPNS
pt033807_POPTR_ VPK-VPFVVKPPEKKHRLPSTYNRFMKEEIQRIKAANPEIPHREAFSTAAKNWARYLPNS
gm003789_Glyma0 SPKAASFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNVIFFLLN-
                 *.  .*********:****:*****::******:************:****   :: * 

AT1G69180.1     PTSITSGGHNMIHGLGFGEKK-
pt033807_POPTR_ -------------GAGSGGSKN
gm003789_Glyma0 ----------------------
BoxShade v3.31 C (beta, 970507) Output
AT1G69180.1     M N L E E K P T M T A S R A S P Q A E H L Y Y V R C S I C N T I L A V G I P L K R M L D T V T V K C G H C G N L S F L T
pt033807_POPTR_    M N L E E K V I D T - - - D V L S S D H L S Y V R C N F C N T V L A V R I P F K R M L D T V T V K C G H C N N L S F L S
gm003789_Glyma0    M N H E D K L T M D - - - L V P P S E H L C Y V R C N F C N T V L A V G I P C K R L L D T V T V K C G H C S N L S F L S
 
AT1G69180.1     T T P P L Q G H - - - - - - V S L T L Q - - - - - - - - - - - - M Q S F G G S D Y K K G S S S S S S S S - T S S D Q P P
pt033807_POPTR_    T R S P N L G N F L D I D H H H L S L Q G V S S N E K L L F K E T Q G F - C T D F R K G E Y S S S S - - - - T S S E P L
gm003789_Glyma0    T R P P S - S Q S Q S V D - H T L S L Q - - - - - - - - - - - - - Q G F - Y S N A K K G Q A S S S S S S P T T S N E S V
 
AT1G69180.1     S P S - P P F V V K P P E K K Q R L P S A Y N R F M R D E I Q R I K S A N P E I P H R E A F S A A A K N W A K Y I P N S
pt033807_POPTR_    V P K - V P F V V K P P E K K H R L P S T Y N R F M K E E I Q R I K A A N P E I P H R E A F S T A A K N W A R Y L P N S
gm003789_Glyma0    S P K A A S F V V K P P E K K H R L P S A Y N R F M K E E I Q R I K A A N P E I P H R E A F S A A A K N V I F F L L N -
 
AT1G69180.1     P T S I T S G G H N M I H G L G F G E K K -
pt033807_POPTR_    - - - - - - - - - - - - - G A G S G G S K N
gm003789_Glyma0    - - - - - - - - - - - - - - - - - - - - - -
 
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