fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G69180.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt033807 not found in 180aa AT1G69180.1 not_1st 0.528875379 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G69180.1     MNLEEKPTMTASRASPQAEHLYYVRCSICNTILAVGIPLKRMLDTVTVKCGHCGNLSFLT
pt033807_POPTR_ MNLEEKVIDTDVLSS---DHLSYVRCNFCNTVLAVRIPFKRMLDTVTVKCGHCNNLSFLS
                ******   *   :*   :** ****.:***:*** **:**************.*****:

AT1G69180.1     TTPPLQG------HVSLTLQ------------MQSFGGSDYKKGSSSSSSSSTSSDQPPS
pt033807_POPTR_ TRSPNLGNFLDIDHHHLSLQGVSSNEKLLFKETQGF-CTDFRKGEYSSSSTSS---EPLV
                * .*  *      *  *:**             *.*  :*::**. ****:*:   :*  

AT1G69180.1     PSPPFVVKPPEKKQRLPSAYNRFMRDEIQRIKSANPEIPHREAFSAAAKNWAKYIPNSPT
pt033807_POPTR_ PKVPFVVKPPEKKHRLPSTYNRFMKEEIQRIKAANPEIPHREAFSTAAKNWARYLPNS--
                *. **********:****:*****::******:************:******:*:***  

AT1G69180.1     SITSGGHNMIHGLGFGEKK-
pt033807_POPTR_ -----------GAGSGGSKN
                           * * * .*
BoxShade v3.31 C (beta, 970507) Output
AT1G69180.1     M N L E E K P T M T A S R A S P Q A E H L Y Y V R C S I C N T I L A V G I P L K R M L D T V T V K C G H C G N L S F L T
pt033807_POPTR_    M N L E E K V I D T D V L S S - - - D H L S Y V R C N F C N T V L A V R I P F K R M L D T V T V K C G H C N N L S F L S
 
AT1G69180.1     T T P P L Q G - - - - - - H V S L T L Q - - - - - - - - - - - - M Q S F G G S D Y K K G S S S S S S S S T S S D Q P P S
pt033807_POPTR_    T R S P N L G N F L D I D H H H L S L Q G V S S N E K L L F K E T Q G F - C T D F R K G E Y S S S S T S S - - - E P L V
 
AT1G69180.1     P S P P F V V K P P E K K Q R L P S A Y N R F M R D E I Q R I K S A N P E I P H R E A F S A A A K N W A K Y I P N S P T
pt033807_POPTR_    P K V P F V V K P P E K K H R L P S T Y N R F M K E E I Q R I K A A N P E I P H R E A F S T A A K N W A R Y L P N S - -
 
AT1G69180.1     S I T S G G H N M I H G L G F G E K K -
pt033807_POPTR_    - - - - - - - - - - - G A G S G G S K N
 
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