fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G69180.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt041742 not found in 180aa AT1G69180.1 1st_1st 0.531914893 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G69180.1     MNLEEKPTMTASRASPQAEHLYYVRCSICNTILAVGIPLKRMLDTVTVKCGHCGNLSFLT
pt041742_POPTR_ MNLEEK----ASTEVPSSEHLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCNNLSFLS
                ******    **   *.:*** ****.:***:****** **:***********.*****:

AT1G69180.1     TTPPLQGHV-----SLTLQ------------MQSFGGSDYKKGSSSSSSSSTSSDQPPSP
pt041742_POPTR_ TRPPNQGQCLDQYHRLSLQGVSSNEKFLFKEKQGF-CTDIRKG--ESSSSSTSSEQ-PVP
                * ** **:       *:**             *.*  :* :**  .********:* * *

AT1G69180.1     SPPFVVKPPEKKQRLPSAYNRFMRDEIQRIKSANPEIPHREAFSAAAKNW--AKYIPNSP
pt041742_POPTR_ TVPFVVKPPEKKHRLPSAYNRFMKEEIKRIKAADPEIPHREAFSTAAKNWARARYLPKSG
                : **********:**********::**:***:*:**********:*****  *:*:*:* 

AT1G69180.1     TSITSGGHNMIHGLGFGEKK
pt041742_POPTR_ AG--SGSPNI----------
                :.  **. *:
BoxShade v3.31 C (beta, 970507) Output
AT1G69180.1     M N L E E K P T M T A S R A S P Q A E H L Y Y V R C S I C N T I L A V G I P L K R M L D T V T V K C G H C G N L S F L T
pt041742_POPTR_    M N L E E K - - - - A S T E V P S S E H L C Y V R C N F C N T V L A V G I P C K R L L D T V T V K C G H C N N L S F L S
 
AT1G69180.1     T T P P L Q G H V - - - - - S L T L Q - - - - - - - - - - - - M Q S F G G S D Y K K G S S S S S S S S T S S D Q P P S P
pt041742_POPTR_    T R P P N Q G Q C L D Q Y H R L S L Q G V S S N E K F L F K E K Q G F - C T D I R K G - - E S S S S S T S S E Q - P V P
 
AT1G69180.1     S P P F V V K P P E K K Q R L P S A Y N R F M R D E I Q R I K S A N P E I P H R E A F S A A A K N W - - A K Y I P N S P
pt041742_POPTR_    T V P F V V K P P E K K H R L P S A Y N R F M K E E I K R I K A A D P E I P H R E A F S T A A K N W A R A R Y L P K S G
 
AT1G69180.1     T S I T S G G H N M I H G L G F G E K K
pt041742_POPTR_    A G - - S G S P N I - - - - - - - - - -
 
0