fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G69180.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt041742 not found in 180aa AT1G69180.1 1st_1st 0.531914893 Ia
Pt033807 not found in 180aa AT1G69180.1 not_1st 0.528875379 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G69180.1     MNLEEKPTMTASRASPQAEHLYYVRCSICNTILAVGIPLKRMLDTVTVKCGHCGNLSFLT
pt033807_POPTR_ MNLEEKVI---DTDVLSSDHLSYVRCNFCNTVLAVRIPFKRMLDTVTVKCGHCNNLSFLS
pt041742_POPTR_ MNLEEKA----STEVPSSEHLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCNNLSFLS
                ******     .    .::** ****.:***:*** ** **:***********.*****:

AT1G69180.1     TTPPLQG------HVSLTLQ------------MQSFGGSDYKKGSSSSSSSSTSSDQPPS
pt033807_POPTR_ TRSPNLGNFLDIDHHHLSLQGVSSNEKLLFKETQGF-CTDFRKGEYSSSSTSS---EPLV
pt041742_POPTR_ TRPPNQGQCLD-QYHRLSLQGVSSNEKFLFKEKQGF-CTDIRKGESSSSSTSS---EQPV
                * .*  *      :  *:**             *.*  :* :**. ****:*:   :   

AT1G69180.1     PSPPFVVKPPEKKQRLPSAYNRFMRDEIQRIKSANPEIPHREAFSAAAKNW--AKYIPNS
pt033807_POPTR_ PKVPFVVKPPEKKHRLPSTYNRFMKEEIQRIKAANPEIPHREAFSTAAKNW--ARYLPNS
pt041742_POPTR_ PTVPFVVKPPEKKHRLPSAYNRFMKEEIKRIKAADPEIPHREAFSTAAKNWARARYLPKS
                *. **********:****:*****::**:***:*:**********:*****  *:*:*:*

AT1G69180.1     PTSITSGGHNMIHGLGF-GEKK-
pt033807_POPTR_ -------------GAGSGGSKN-
pt041742_POPTR_ -------------GAGS-GSPNI
                             * *  *. :
BoxShade v3.31 C (beta, 970507) Output
AT1G69180.1     M N L E E K P T M T A S R A S P Q A E H L Y Y V R C S I C N T I L A V G I P L K R M L D T V T V K C G H C G N L S F L T
pt033807_POPTR_    M N L E E K V I - - - D T D V L S S D H L S Y V R C N F C N T V L A V R I P F K R M L D T V T V K C G H C N N L S F L S
pt041742_POPTR_    M N L E E K A - - - - S T E V P S S E H L C Y V R C N F C N T V L A V G I P C K R L L D T V T V K C G H C N N L S F L S
 
AT1G69180.1     T T P P L Q G - - - - - - H V S L T L Q - - - - - - - - - - - - M Q S F G G S D Y K K G S S S S S S S S T S S D Q P P S
pt033807_POPTR_    T R S P N L G N F L D I D H H H L S L Q G V S S N E K L L F K E T Q G F - C T D F R K G E Y S S S S T S S - - - E P L V
pt041742_POPTR_    T R P P N Q G Q C L D - Q Y H R L S L Q G V S S N E K F L F K E K Q G F - C T D I R K G E S S S S S T S S - - - E Q P V
 
AT1G69180.1     P S P P F V V K P P E K K Q R L P S A Y N R F M R D E I Q R I K S A N P E I P H R E A F S A A A K N W - - A K Y I P N S
pt033807_POPTR_    P K V P F V V K P P E K K H R L P S T Y N R F M K E E I Q R I K A A N P E I P H R E A F S T A A K N W - - A R Y L P N S
pt041742_POPTR_    P T V P F V V K P P E K K H R L P S A Y N R F M K E E I K R I K A A D P E I P H R E A F S T A A K N W A R A R Y L P K S
 
AT1G69180.1     P T S I T S G G H N M I H G L G F - G E K K -
pt033807_POPTR_    - - - - - - - - - - - - - G A G S G G S K N -
pt041742_POPTR_    - - - - - - - - - - - - - G A G S - G S P N I
 
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