fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G69180.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb022018 not found in 321aa AT1G69180.1 1st_1st 0.483282674 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT1G69180.1     MNLEEKPTMTASRASPQAEHLYYVRCSICNTILAVGIPLKRMLDTVTVKCGHCGNLSFLT
Sb022018_Sorbi1 MDM-----------VSQSEHLCYVRCTYCNTVLAVGVPCKRLMDTVTVKCGHCNNLSYLS
                *::            .*:*** ****: ***:****:* **::**********.***:*:

AT1G69180.1     TTPPLQGHVSLT------LQMQSFGGSDYKKGSSSSSSSSTSSDQPPSPSPPFVVKPPEK
Sb022018_Sorbi1 PRPPMVQPLSPTDHPLGPFQCQG-PCNDCRRNQPLPLASPTSTEL--SPRMPFVVKPPEK
                . **:   :* *      :* *.   .* ::... . :*.**::   **  *********

AT1G69180.1     KQRLPSAYNRFMRDEIQRIKSANPEIPHREAFSAAAKNWAKYIPNSPTSITSGGHN----
Sb022018_Sorbi1 KHRLPSAYNRFMREEIQRIKAAKPDIPHREAFSMAAKNWAKCDPRCSTTASTATSNSAPE
                *:***********:******:*:*:******** *******  *...*: ::.  *    

AT1G69180.1     -----------------------MIHGLGFGEKK----
Sb022018_Sorbi1 PRVVPTPQVTEARFDLEDRAKEQVIESFDIFKQIERSI
                                       :*..:.: ::
BoxShade v3.31 C (beta, 970507) Output
AT1G69180.1     M N L E E K P T M T A S R A S P Q A E H L Y Y V R C S I C N T I L A V G I P L K R M L D T V T V K C G H C G N L S F L T
Sb022018_Sorbi1    M D M - - - - - - - - - - - V S Q S E H L C Y V R C T Y C N T V L A V G V P C K R L M D T V T V K C G H C N N L S Y L S
 
AT1G69180.1     T T P P L Q G H V S L T - - - - - - L Q M Q S F G G S D Y K K G S S S S S S S S T S S D Q P P S P S P P F V V K P P E K
Sb022018_Sorbi1    P R P P M V Q P L S P T D H P L G P F Q C Q G - P C N D C R R N Q P L P L A S P T S T E L - - S P R M P F V V K P P E K
 
AT1G69180.1     K Q R L P S A Y N R F M R D E I Q R I K S A N P E I P H R E A F S A A A K N W A K Y I P N S P T S I T S G G H N - - - -
Sb022018_Sorbi1    K H R L P S A Y N R F M R E E I Q R I K A A K P D I P H R E A F S M A A K N W A K C D P R C S T T A S T A T S N S A P E
 
AT1G69180.1     - - - - - - - - - - - - - - - - - - - - - - - M I H G L G F G E K K - - - -
Sb022018_Sorbi1    P R V V P T P Q V T E A R F D L E D R A K E Q V I E S F D I F K Q I E R S I
 
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