fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT1G69180.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm000785 not found in 161aa AT1G69180.1 1st_1st 0.531914893 Ia
Gm003789 not found in 160aa AT1G69180.1 not_1st 0.531914893 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT1G69180.1     MNLEEKPTMTASRASPQAEHLYYVRCSICNTILAVGIPLKRMLDTVTVKCGHCGNLSFLT
gm000785_Glyma0 MNHEDKLTMD---LVPPSEHLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSFLS
gm003789_Glyma0 MNHEDKLTMD---LVPPSEHLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSFLS
                ** *:* **      * :*** ****.:***:****** **:***********.*****:

AT1G69180.1     TTPPLQGHVSL---TLQMQSFGGSDYKKGSSSSSSSS-TSSDQPPSP-SPPFVVKPPEKK
gm000785_Glyma0 TRPPSSQNQSIDHTTLSLQQGFYSNAKKGQASSSSSSPTTSNESVSPKAASFVVKPPEKK
gm003789_Glyma0 TRPPSSQSQSVDH-TLSLQQGFYSNAKKGQASSSSSSPTTSNESVSPKAASFVVKPPEKK
                * ** .   *:   **.:*.   *: ***.:****** *:*::. ** :..*********

AT1G69180.1     QRLPSAYNRFMRDEIQRIKSANPEIPHREAFSAAAKNWAKYIPNSPTSITSGGHNMIHGL
gm000785_Glyma0 HRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNVIFF-SNP---------------
gm003789_Glyma0 HRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNVIFFLLN----------------
                :**********::******:*****************   :  *                

AT1G69180.1     GFGEKK
gm000785_Glyma0 ------
gm003789_Glyma0 ------
BoxShade v3.31 C (beta, 970507) Output
AT1G69180.1     M N L E E K P T M T A S R A S P Q A E H L Y Y V R C S I C N T I L A V G I P L K R M L D T V T V K C G H C G N L S F L T
gm000785_Glyma0    M N H E D K L T M D - - - L V P P S E H L C Y V R C N F C N T V L A V G I P C K R L L D T V T V K C G H C S N L S F L S
gm003789_Glyma0    M N H E D K L T M D - - - L V P P S E H L C Y V R C N F C N T V L A V G I P C K R L L D T V T V K C G H C S N L S F L S
 
AT1G69180.1     T T P P L Q G H V S L - - - T L Q M Q S F G G S D Y K K G S S S S S S S S - T S S D Q P P S P - S P P F V V K P P E K K
gm000785_Glyma0    T R P P S S Q N Q S I D H T T L S L Q Q G F Y S N A K K G Q A S S S S S S P T T S N E S V S P K A A S F V V K P P E K K
gm003789_Glyma0    T R P P S S Q S Q S V D H - T L S L Q Q G F Y S N A K K G Q A S S S S S S P T T S N E S V S P K A A S F V V K P P E K K
 
AT1G69180.1     Q R L P S A Y N R F M R D E I Q R I K S A N P E I P H R E A F S A A A K N W A K Y I P N S P T S I T S G G H N M I H G L
gm000785_Glyma0    H R L P S A Y N R F M K E E I Q R I K A A N P E I P H R E A F S A A A K N V I F F - S N P - - - - - - - - - - - - - - -
gm003789_Glyma0    H R L P S A Y N R F M K E E I Q R I K A A N P E I P H R E A F S A A A K N V I F F L L N - - - - - - - - - - - - - - - -
 
AT1G69180.1     G F G E K K
gm000785_Glyma0    - - - - - -
gm003789_Glyma0    - - - - - -
 
0